RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 COQ8AQ8NI60 647 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 CHPT1Q8WUD6 406 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 RBM14Q96PK6 669 aaKnown RBP14.65□□□□□ -0.06
RFFL-211ENST00000584541 RAB18Q9NP72 206 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 SVEP1Q4LDE5 3571 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 A0A0A6YYJ9 748 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 DNAJC9-AS1A6NH13 148 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 NCBP2LA6PVI3 153 aaKnown RBP14.64□□□□□ -0.07
RFFL-211ENST00000584541 NBR2O15453 112 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 TCF21O43680 179 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 SPDEFO95238 335 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 DUS4LO95620 317 aaKnown RBP14.64□□□□□ -0.07
RFFL-211ENST00000584541 CDS2O95674 445 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 HILS1P60008 231 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 KRTAP21-3Q3LHN1 58 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 VMA21Q3ZAQ7 101 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 DMBX1Q8NFW5 382 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 RBPMSQ93062 196 aaKnown RBP14.64□□□□□ -0.07
RFFL-211ENST00000584541 IL22RA2Q969J5 263 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 R3HDM4Q96D70 268 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 RBMXL1Q96E39 390 aaKnown RBP14.64□□□□□ -0.07
RFFL-211ENST00000584541 MOB4Q9Y3A3 225 aa14.64□□□□□ -0.07
RFFL-211ENST00000584541 CLDN34H7C241 214 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 M0QZK8 103 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 PLGLAQ15195 96 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 TMEM268Q5VZI3 342 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 NPBQ8NG41 125 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 OR52B4Q8NGK2 314 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 RNASE11Q8TAA1 199 aaKnown RBP14.63□□□□□ -0.07
RFFL-211ENST00000584541 VSTM2AQ8TAG5 236 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 ZNF431Q8TF32 576 aaPredicted RBP14.63□□□□□ -0.07
RFFL-211ENST00000584541 RITA1Q96K30 269 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 RHOVQ96L33 236 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 TMEM56Q96MV1 263 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 PHB2Q99623 299 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 SEC22CQ9BRL7 303 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 TMEM56-RWDD3S4R434 201 aa14.63□□□□□ -0.07
RFFL-211ENST00000584541 ANK3Q12955 4377 aaKnown RBP14.62□□□□□ -0.07
RFFL-211ENST00000584541 MARCH11A6NNE9 402 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 RRHO14718 337 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 CREBL2O60519 120 aaPredicted RBP14.62□□□□□ -0.07
RFFL-211ENST00000584541 KRASP01116 189 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 CNTFRP26992 372 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 AKR1C2P52895 323 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 F2RL1P55085 397 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 UBE2KP61086 200 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 PSG5Q15238 335 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 FBLN7Q53RD9 439 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 SELENOHQ8IZQ5 122 aaKnown RBP14.62□□□□□ -0.07
RFFL-211ENST00000584541 RRNAD1Q96FB5 475 aaKnown RBP14.62□□□□□ -0.07
RFFL-211ENST00000584541 DUX5Q96PT3 197 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 RASL11BQ9BPW5 248 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 CHIAQ9BZP6 476 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 PRR13Q9NZ81 148 aa14.62□□□□□ -0.07
RFFL-211ENST00000584541 SETD2Q9BYW2 2564 aaPredicted RBP14.61□□□□□ -0.07
RFFL-211ENST00000584541 DUXBA0A1W2PPF3 345 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 SRRM4A7MD48 611 aaKnown RBP14.61□□□□□ -0.07
RFFL-211ENST00000584541 SNRPGP15A8MWD9 76 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 FGF16O43320 207 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 SLC25A17O43808 307 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 NDUFA3O95167 84 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 G6PCP35575 357 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 POU2AF1Q16633 256 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 TATDN3Q17R31 274 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 ANKRD55Q3KP44 614 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 SSX9Q7RTT3 188 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 H2BFWTQ7Z2G1 175 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 VKORC1L1Q8N0U8 176 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 LRTM2Q8N967 370 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 TEX45Q8NA69 505 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 MITD1Q8WV92 249 aa14.61□□□□□ -0.07
RFFL-211ENST00000584541 METTL1Q9UBP6 276 aaKnown RBP14.61□□□□□ -0.07
RFFL-211ENST00000584541 NSD1Q96L73 2696 aaPredicted RBP14.61□□□□□ -0.07
RFFL-211ENST00000584541 FN1P02751 2386 aaKnown RBP14.61□□□□□ -0.07
RFFL-211ENST00000584541 ZFHX3Q15911 3703 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 A0A0B4J2A0 478 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 OR2A4O95047 310 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 IGKV1-39P01597 117 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 IGLV2-23P01705 113 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 IGKV1D-39P04432 117 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 SAA1P0DJI8 122 aaPredicted RBP14.6□□□□□ -0.07
RFFL-211ENST00000584541 OR4A47Q6IF82 309 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 C12orf45Q8N5I9 185 aaPredicted RBP14.6□□□□□ -0.07
RFFL-211ENST00000584541 SLC35G3Q8N808 338 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 OR4A5Q8NH83 315 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 LHFPL5Q8TAF8 219 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 SEC22AQ96IW7 307 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 OR2A7Q96R45 310 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 FBXL15Q9H469 300 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 ESM1Q9NQ30 184 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 PLSCR3Q9NRY6 295 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 TMEM140Q9NV12 185 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 SHPKQ9UHJ6 478 aa14.6□□□□□ -0.07
RFFL-211ENST00000584541 CHST1O43916 411 aa14.59□□□□□ -0.07
RFFL-211ENST00000584541 GPR137BO60478 399 aa14.59□□□□□ -0.07
RFFL-211ENST00000584541 RNASE1P07998 156 aaKnown RBP14.59□□□□□ -0.07
RFFL-211ENST00000584541 VDAC1P21796 283 aa14.59□□□□□ -0.07
RFFL-211ENST00000584541 C5orf64Q2M2E5 130 aa14.59□□□□□ -0.07
RFFL-211ENST00000584541 LIN54Q6MZP7 749 aa14.59□□□□□ -0.07
RFFL-211ENST00000584541 FAM219AQ8IW50 185 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms