RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TMEM68Q96MH6 324 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 GPHA2Q96T91 129 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 SLC5A7Q9GZV3 580 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 CCL28Q9NRJ3 127 aa15.82■□□□□ 0.12
SS18-224ENST00000584083 MSGN1A6NI15 193 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 ACTL6BO94805 426 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 SAA1P0DJI8 122 aaPredicted RBP15.81■□□□□ 0.12
SS18-224ENST00000584083 APELAP0DMC3 54 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 FXYD4P59646 89 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 MRGPRG-AS1Q2M3A8 158 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 ZNF66Q6ZN08 573 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 DCUN1D4Q92564 292 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 DNAH3Q8TD57 4116 aa15.81■□□□□ 0.12
SS18-224ENST00000584083 SMIM31A0A1B0GVY4 71 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 LINC01619G3V211 115 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 H3BUA1 57 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 MPPED1O15442 326 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 TNFSF12O43508 249 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 CREBL2O60519 120 aaPredicted RBP15.8■□□□□ 0.12
SS18-224ENST00000584083 EIF4EP06730 217 aaKnown RBP15.8■□□□□ 0.12
SS18-224ENST00000584083 PRSS3P35030 304 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 SLURP1P55000 103 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 EIF4EBP1Q13541 118 aaPredicted RBP15.8■□□□□ 0.12
SS18-224ENST00000584083 RHOVQ96L33 236 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 ZNF430Q9H8G1 570 aaPredicted RBP15.8■□□□□ 0.12
SS18-224ENST00000584083 COA4Q9NYJ1 87 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 EHFQ9NZC4 300 aa15.8■□□□□ 0.12
SS18-224ENST00000584083 IGHV4OR15-8A0A075B7B6 117 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 A0A087WW49 117 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 OVOL1O14753 267 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 APOA1P02647 267 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 RORCP51449 518 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 HERV-K104P61576 105 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 MSMO1Q15800 293 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 ANKRD13BQ86YJ7 626 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 MMD2Q8IY49 270 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 VKORC1L1Q8N0U8 176 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 GIMAP1Q8WWP7 306 aa15.79■□□□□ 0.12
SS18-224ENST00000584083 SRSF12Q8WXF0 261 aaKnown RBP15.79■□□□□ 0.12
SS18-224ENST00000584083 NAA50Q9GZZ1 169 aaKnown RBP15.79■□□□□ 0.12
SS18-224ENST00000584083 A0A0G2JLM5 398 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 RAMP3O60896 148 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 HSPB1P04792 205 aaKnown RBP15.78■□□□□ 0.12
SS18-224ENST00000584083 KIR2DS2P43631 304 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 GPR107Q5VW38 600 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 TMEM17Q86X19 198 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 ZBTB34Q8NCN2 500 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 OR5H2Q8NGV7 314 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 DLX4Q92988 240 aaPredicted RBP15.78■□□□□ 0.12
SS18-224ENST00000584083 CMTM3Q96MX0 182 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 MRPS26Q9BYN8 205 aaKnown RBP15.78■□□□□ 0.12
SS18-224ENST00000584083 SCOCQ9UIL1 159 aa15.78■□□□□ 0.12
SS18-224ENST00000584083 HPGDSO60760 199 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 HRASP01112 189 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 PMP2P02689 132 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 ECI1P42126 302 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 RFX2P48378 723 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 TAS2R46P59540 309 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 VSTM2AQ8TAG5 236 aa15.77■□□□□ 0.12
SS18-224ENST00000584083 SULT1C2O00338 296 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 OR2A4O95047 310 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 GABARAPO95166 117 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 OR9G9P0C7N8 305 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 BRWD1-AS2P59051 145 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 CATR1Q13166 79 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 DYRK1AQ13627 763 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 CTF1Q16619 201 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 MZT2AQ6P582 158 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 SNX29P2Q8IUI4 249 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 SPAG16Q8N0X2 631 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 OR2A7Q96R45 310 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 SPIN2AQ99865 258 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 SPIN2BQ9BPZ2 258 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 TINAGL1Q9GZM7 467 aaPredicted RBP15.76■□□□□ 0.11
SS18-224ENST00000584083 ANAPC10Q9UM13 185 aa15.76■□□□□ 0.11
SS18-224ENST00000584083 ANKRD34BA5PLL1 514 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 NAT1P18440 290 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 ELK1P19419 428 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 INSL3P51460 131 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 C10orf55Q5SWW7 151 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 DHRS11Q6UWP2 260 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 SSX9Q7RTT3 188 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 GPR141Q7Z602 305 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 ADAD2Q8NCV1 583 aaKnown RBP15.75■□□□□ 0.11
SS18-224ENST00000584083 AP3S1Q92572 193 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 BORCS5Q969J3 196 aa15.75■□□□□ 0.11
SS18-224ENST00000584083 ZNF2Q9BSG1 426 aaPredicted RBP15.75■□□□□ 0.11
SS18-224ENST00000584083 FAM25AB3EWG3 89 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 FAM25CB3EWG5 89 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 FAM25GB3EWG6 89 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 KBTBD11O94819 623 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 BRI3O95415 125 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 HLA-DMAP28067 261 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 DEFA5Q01523 94 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 ZNF818PQ6ZRF7 136 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 OR51H1Q8NH63 302 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 TMEM167AQ8TBQ9 72 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 GPX8Q8TED1 209 aa15.74■□□□□ 0.11
SS18-224ENST00000584083 PRR25Q96S07 402 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms