RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PROP1O75360 226 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 SPDEFO95238 335 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 NAPSAO96009 420 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 CSN3P07498 182 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 MAPK3P27361 379 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 HTR2CP28335 458 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 RPS27AP62979 156 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 HLA-DRB3P79483 266 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 CBX3Q13185 183 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 UNC119Q13432 240 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 KLF5Q13887 457 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 INSL4Q14641 139 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 IGSF11Q5DX21 431 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 LCN12Q6JVE5 192 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF880Q6PDB4 577 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 GTSCR1Q86UQ5 136 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF383Q8NA42 475 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 ZNF555Q8NEP9 628 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 TMEM80Q96HE8 168 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 RNF5Q99942 180 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 UQCC2Q9BRT2 126 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 HDHD3Q9BSH5 251 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 TMEM59Q9BXS4 323 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 PLEKHA3Q9HB20 300 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 SMPD3Q9NY59 655 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 GHRLQ9UBU3 117 aa5.91□□□□□ -1.46
SMCHD1-210ENST00000583800 A0A0A6YYD4 124 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 A0A0G2JLM5 398 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 ITGB1BP1O14713 200 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 UBBP0CG47 229 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 CELP19835 753 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 CEACAM6P40199 344 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 TAS2R43P59537 309 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 CD81P60033 236 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 PJVKQ0ZLH3 352 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 MED21Q13503 144 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 MOGAT2Q3SYC2 334 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 SERTAD4-AS1Q5TG53 156 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 MOB1BQ7L9L4 216 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 PDPNQ86YL7 162 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 Q8N402 240 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 GGHQ92820 318 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 TSNAXQ99598 290 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 TM2D1Q9BX74 207 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 WFDC10AQ9H1F0 79 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 HIPK2Q9H2X6 1198 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 MGAT4CQ9UBM8 478 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 PEF1Q9UBV8 284 aaKnown RBP5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 AK3Q9UIJ7 227 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 CEPT1Q9Y6K0 416 aa5.9□□□□□ -1.46
SMCHD1-210ENST00000583800 TRBV6-6A0A0A6YYG2 114 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 EFCAB10A6NFE3 127 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 M0R1X1 148 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 MYL12BO14950 172 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 RBMXL2O75526 392 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 CNIH1O95406 144 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 IGLV2-23P01705 113 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 APOA2P02652 100 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 CD7P09564 240 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 SCTP09683 121 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 APELAP0DMC3 54 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 ZBTB25P24278 435 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 ST3GAL4Q11206 333 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 RPEL1Q2QD12 228 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 RBM48Q5RL73 367 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 GLT8D1Q68CQ7 371 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 ZNF343Q6P1L6 599 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 LINC00322Q6ZN03 302 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 LRRTM1Q86UE6 522 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 CYGBQ8WWM9 190 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 SPXQ9BT56 116 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 S100A14Q9HCY8 104 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 SLC35D1Q9NTN3 355 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 PLEKHJ1Q9NW61 149 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 COA4Q9NYJ1 87 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 ZNF221Q9UK13 617 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 HERC2O95714 4834 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 FRAS1Q86XX4 4008 aa5.89□□□□□ -1.47
SMCHD1-210ENST00000583800 IGKV1-6A0A0C4DH72 117 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 RBMY1BA6NDE4 496 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 RBMY1EA6NEQ0 496 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 TMEM14DPA8MWL7 114 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 SOCS1O15524 211 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 OR2A4O95047 310 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 BRI3O95415 125 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 CRYGBP07316 175 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 HOXB5P09067 269 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 RBMY1DP0C7P1 496 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 EDN2P20800 178 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 AADACP22760 399 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 LGALS7P47929 136 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 WNT4P56705 351 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 QRFPP83859 136 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 C1orf100Q5SVJ3 147 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 AHSA2Q719I0 299 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 IL17DQ8TAD2 202 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms