RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 EIF4EBP1Q13541 118 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 CLINT1Q14677 625 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 SPANXN5Q5MJ07 72 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 C11orf71Q6IPW1 123 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 CLEC9AQ6UXN8 241 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 ABHD12Q8N2K0 398 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 LILRB2Q8N423 598 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 TMEM217Q8N7C4 229 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 UBAC2Q8NBM4 344 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 WFDC11Q8NEX6 87 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 TMED6Q8WW62 240 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 Q96MF0 132 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 RBKSQ9H477 322 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 CTSZQ9UBR2 303 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 AMMECR1Q9Y4X0 333 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 OTOGQ6ZRI0 2925 aa7.62□□□□□ -1.19
SS18-220ENST00000582092 HRNRQ86YZ3 2850 aaPredicted RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 YLPM1P49750 1951 aaKnown RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 TEP1Q99973 2627 aaKnown RBP7.62□□□□□ -1.19
SS18-220ENST00000582092 LOC105371242A0A075B767 164 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 SHOXO15266 292 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 MMP23AO75900 390 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 IGHV1-8P0DP01 117 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 CDKN1AP38936 164 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 DYNLT3P51808 116 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 MIDNQ504T8 468 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 FAM74A1Q5RGS3 127 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 WDR25Q64LD2 544 aaPredicted RBP7.61□□□□□ -1.19
SS18-220ENST00000582092 Q6ZRM9 215 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 TCF23Q7RTU1 214 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 C8orf31Q8N9H6 132 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 ZNF439Q8NDP4 499 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 OR5C1Q8NGR4 320 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 OR13D1Q8NGV5 346 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 C5orf30Q96GV9 206 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 ATP5SQ99766 215 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
SS18-220ENST00000582092 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 NARFLQ9H6Q4 476 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 PATZ1Q9HBE1 687 aaKnown RBP7.61□□□□□ -1.19
SS18-220ENST00000582092 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
SS18-220ENST00000582092 FKBP11Q9NYL4 201 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 C2CD3Q4AC94 2353 aa7.61□□□□□ -1.19
SS18-220ENST00000582092 TANC2Q9HCD6 1990 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 IGSF23A1L1A6 192 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 LEUTXA8MZ59 168 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 H3BP45 60 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 I3L521 148 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 OVOL3O00110 214 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 TXNL1O43396 289 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 ENSAO43768 121 aaKnown RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 LY6HO94772 140 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 RBP4P02753 201 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 NMBP08949 121 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 MC5RP33032 325 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 CAMLGP49069 296 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 HOXA1P49639 335 aaPredicted RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 RAB5CP51148 216 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 RAB13P51153 203 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 DSCR9P59020 149 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 SPCS3P61009 180 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 RAB2AP61019 212 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 RPS16P62249 146 aaKnown RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 RAB11AP62491 216 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 TMEM267Q0VDI3 215 aaPredicted RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 ATP6V1FQ16864 119 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 FAM71F2Q6NXP2 309 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 TGIF2LXQ8IUE1 241 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 LINC00311Q8N616 119 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 HSD17B11Q8NBQ5 300 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 ZNF596Q8TC21 504 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 DTD1Q8TEA8 209 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 TNFRSF14Q92956 283 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 LHX4Q969G2 390 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 FLYWCH2Q96CP2 140 aaKnown RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 SAT2Q96F10 170 aaPredicted RBP7.6□□□□□ -1.19
SS18-220ENST00000582092 RHOVQ96L33 236 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 CLEC7AQ9BXN2 247 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 MED9Q9NWA0 146 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 HSPB7Q9UBY9 170 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 PRNDQ9UKY0 176 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 ACANP16112 2415 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 ARFGEF3Q5TH69 2177 aa7.6□□□□□ -1.19
SS18-220ENST00000582092 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 RPS10-NUDT3A0A1W2PQS6 291 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 IFNA10P01566 189 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 FGF2P09038 288 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 OR8U8P0C7N1 319 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 METTL15P1P0C7V9 234 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 CEACAM3P40198 252 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 PDLIM4P50479 330 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 LINC00205P59089 165 aa7.59□□□□□ -1.19
SS18-220ENST00000582092 CLEC12BQ2HXU8 276 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms