RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CPAMD8Q8IZJ3 1885 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 SNAPC4Q5SXM2 1469 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 PLB1Q6P1J6 1458 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 MYH10P35580 1976 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CCDC88CQ9P219 2028 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM235A6NFC5 223 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 F5H768 121 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 M0QZ92 97 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 AZIN1O14977 448 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 GNRH2O43555 120 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 GSTZ1O43708 216 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 IL6P05231 212 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 S100A6P06703 90 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 IL3P08700 152 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 UGT2B7P16662 529 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CRHBPP24387 322 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 ALDH3A1P30838 453 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 G6PCP35575 357 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 HSPA9P38646 679 aaKnown RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CA7P43166 264 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 EMP1P54849 157 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CXCR4P61073 352 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 FKBP1AP62942 108 aaKnown RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 HLA-DRB3P79483 266 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 SMAGPQ0VAQ4 97 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 MLLT11Q13015 90 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 HIST3H3Q16695 136 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 C4orf26Q17RF5 130 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 AKIRIN2Q53H80 203 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 COQ5Q5HYK3 327 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CLVS2Q5SYC1 327 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 FAM78BQ5VT40 261 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 LCN8Q6JVE9 175 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CD200R1LQ6Q8B3 271 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 AGTRAPQ6RW13 159 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 DCXRQ7Z4W1 244 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 C10orf67Q8IYJ2 551 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 RIBC1Q8N443 379 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CCDC112Q8NEF3 446 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 FNDC9Q8TBE3 224 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC37A2Q8TED4 501 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 Q8WTZ3 238 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 RNASE6Q93091 150 aaKnown RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 TESCQ96BS2 214 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 PPCDCQ96CD2 204 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 ANKRD36BP1Q96IX9 119 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 MGLLQ99685 303 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM222Q9H0R3 208 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 XAGE1AQ9HD64 81 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 BABAM2Q9NXR7 383 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 EMC3Q9P0I2 261 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 AK3Q9UIJ7 227 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 SNX12Q9UMY4 172 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 KLK5Q9Y337 293 aaPredicted RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 LSM5Q9Y4Y9 91 aaKnown RBP0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 HEATR5BQ9P2D3 2071 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 REREQ9P2R6 1566 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 MYO3BQ8WXR4 1341 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 OBSL1O75147 1896 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 CCDC88AQ3V6T2 1871 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 MYH3P11055 1940 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 SCN10AQ9Y5Y9 1956 aa0.56□□□□□ -2.32
SMCHD1-206ENST00000581631 NUP160Q12769 1436 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ZFHX2Q9C0A1 2572 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 WDR90Q96KV7 1748 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 FN1P02751 2386 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 SBF1O95248 1867 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 IGHV1-69-2A0A0G2JMI3 117 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 TINCRA0A1B0GVN0 87 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 OR6C6A6NF89 314 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RFPL4AA6NLU0 287 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 OR5K4A6NMS3 321 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 C2orf74A8MZ97 194 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RFPL4AL1F8VTS6 287 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 H0Y980 276 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 H3BPC8 53 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 APOMO95445 188 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 NPYP01303 97 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 IFNA5P01569 189 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 TYMSP04818 313 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ATP5G1P05496 136 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 HLA-DQB2P05538 268 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 CALB1P05937 261 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 SERPINA6P08185 405 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 UCHL1P09936 223 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 OR5G3P0C626 314 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF728P0DKX0 622 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 COX5BP10606 129 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 DEFA4P12838 97 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 CD24P25063 80 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RPL12P30050 165 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RPL27AP46776 148 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 OMPP47874 163 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 MARCKSL1P49006 195 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 SULT1A1P50225 295 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 NKX2-5P52952 324 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RAB5BP61020 215 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 AP1S1P61966 158 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 HERVK_113P63121 156 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms