RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 OSR1Q8TAX0 266 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 MOB3AQ96BX8 217 aa15.66■□□□□ 0.1
SS18-218ENST00000581021 ZNF2Q9BSG1 426 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 FOXA2Q9Y261 457 aaPredicted RBP15.66■□□□□ 0.1
SS18-218ENST00000581021 RAMP3O60896 148 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 IGLL1P15814 213 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 GNRHRP30968 328 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 PRSS8Q16651 343 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 UNQ5815/PRO19632Q6UWF5 114 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 ZNF66Q6ZN08 573 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 OR52I2Q8NH67 350 aa15.65■□□□□ 0.1
SS18-218ENST00000581021 CD33P20138 364 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 RCVRNP35243 200 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 RAB9AP51151 201 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 HERV-K104P61576 105 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 VMA21Q3ZAQ7 101 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 AKIRIN2Q53H80 203 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 TEX45Q8NA69 505 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 C4orf3Q8WVX3 66 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 SLIRPQ9GZT3 109 aaKnown RBP15.64■□□□□ 0.09
SS18-218ENST00000581021 ZNF430Q9H8G1 570 aaPredicted RBP15.64■□□□□ 0.09
SS18-218ENST00000581021 KLK11Q9UBX7 282 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 PRELID3BQ9Y3B1 194 aa15.64■□□□□ 0.09
SS18-218ENST00000581021 CCL24O00175 119 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 SULT1C2O00338 296 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 SLC6A1P30531 599 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 ACTBL2Q562R1 376 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 C10orf55Q5SWW7 151 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 OR4S2Q8NH73 311 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 OR5B12Q96R08 314 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 DCUN1D5Q9BTE7 237 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 RBM38Q9H0Z9 239 aaKnown RBP15.63■□□□□ 0.09
SS18-218ENST00000581021 SCOCQ9UIL1 159 aa15.63■□□□□ 0.09
SS18-218ENST00000581021 M0QYG6 137 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 RGS5O15539 181 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 CNIH1O95406 144 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 PRB2P02812 416 aaPredicted RBP15.62■□□□□ 0.09
SS18-218ENST00000581021 MYCNOSP40205 109 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 DGCR2P98153 550 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 FHL3Q13643 280 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 TCTEX1D1Q8N7M0 179 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 ZBTB34Q8NCN2 500 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 UBE2E2Q96LR5 201 aa15.62■□□□□ 0.09
SS18-218ENST00000581021 ALX4Q9H161 411 aaPredicted RBP15.62■□□□□ 0.09
SS18-218ENST00000581021 I3L521 148 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 APELAP0DMC3 54 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 TMEM65Q6PI78 240 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 SPAG16Q8N0X2 631 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 PUSL1Q8N0Z8 303 aaKnown RBP15.61■□□□□ 0.09
SS18-218ENST00000581021 OR51H1Q8NH63 302 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 MS4A10Q96PG2 267 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 TINAGL1Q9GZM7 467 aaPredicted RBP15.61■□□□□ 0.09
SS18-218ENST00000581021 MTFP1Q9UDX5 166 aa15.61■□□□□ 0.09
SS18-218ENST00000581021 TMEM267Q0VDI3 215 aaPredicted RBP15.6■□□□□ 0.09
SS18-218ENST00000581021 TNXAQ16473 311 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 VAX1Q5SQQ9 334 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 OR5T1Q8NG75 326 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 OR5M8Q8NGP6 311 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 OR6F1Q8NGZ6 308 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 SRSF12Q8WXF0 261 aaKnown RBP15.6■□□□□ 0.09
SS18-218ENST00000581021 VSIG4Q9Y279 399 aa15.6■□□□□ 0.09
SS18-218ENST00000581021 A0A1B0GW64 132 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 MSGN1A6NI15 193 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 RBFOX2O43251 390 aaKnown RBP eCLIP15.59■□□□□ 0.09
SS18-218ENST00000581021 NOL3O60936 208 aaKnown RBP15.59■□□□□ 0.09
SS18-218ENST00000581021 RBMXL2O75526 392 aaKnown RBP15.59■□□□□ 0.09
SS18-218ENST00000581021 PGLYRP1O75594 196 aaPredicted RBP15.59■□□□□ 0.09
SS18-218ENST00000581021 TPPPO94811 219 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 KBTBD11O94819 623 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 RLN1P04808 185 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 KIR2DS2P43631 304 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 RUNX1Q01196 453 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 DEFA5Q01523 94 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 AADACL3Q5VUY0 350 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 SSX9Q7RTT3 188 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 OR4D10Q8NGI6 311 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 RHOVQ96L33 236 aa15.59■□□□□ 0.09
SS18-218ENST00000581021 NXF2Q9GZY0 626 aaKnown RBP15.59■□□□□ 0.09
SS18-218ENST00000581021 E7EUB6 86 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 S1PR2O95136 353 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 CD3DP04234 171 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 MYOD1P15172 320 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 FOXB2Q5VYV0 432 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 POC5Q8NA72 575 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 OR11H1Q8NG94 326 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 TMEM167AQ8TBQ9 72 aa15.58■□□□□ 0.08
SS18-218ENST00000581021 RCC1LQ96I51 464 aaKnown RBP15.58■□□□□ 0.08
SS18-218ENST00000581021 C6orf62Q9GZU0 229 aaPredicted RBP15.58■□□□□ 0.08
SS18-218ENST00000581021 OR2A4O95047 310 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 IGHV3-11P01762 117 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 RAB25P57735 213 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 TPPP2P59282 170 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 CATR1Q13166 79 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 PHLDA2Q53GA4 152 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 PDLIM3Q53GG5 364 aaPredicted RBP15.57■□□□□ 0.08
SS18-218ENST00000581021 OR4A47Q6IF82 309 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 PYHIN1Q6K0P9 492 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 MMD2Q8IY49 270 aa15.57■□□□□ 0.08
SS18-218ENST00000581021 OR2A7Q96R45 310 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms