RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 hCG_2014768A0A024R1R8 64 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 IGHV3-72A0A0B4J1Y9 119 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 CD24P25063 80 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 MC5RP33032 325 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 HES1Q14469 280 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 KRTAP24-1Q3LI83 254 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 TMEM219Q86XT9 240 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 CASTOR1Q8WTX7 329 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 DDB2Q92466 427 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 C5orf30Q96GV9 206 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 TP53RKQ96S44 253 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 TMED3Q9Y3Q3 217 aa12.42□□□□□ -0.42
SS18-216ENST00000580751 TNFSF12O43508 249 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 OR2F2O95006 317 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 IFNA21P01568 189 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 TMEM11P17152 192 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 EBI3Q14213 229 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 ANKRD55Q3KP44 614 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.41□□□□□ -0.42
SS18-216ENST00000580751 OR5AN1Q8NGI8 311 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 RBPMSQ93062 196 aaKnown RBP12.41□□□□□ -0.42
SS18-216ENST00000580751 PPP1R14BQ96C90 147 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 NPFFR1Q9GZQ6 430 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 COMMD9Q9P000 198 aa12.41□□□□□ -0.42
SS18-216ENST00000580751 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
SS18-216ENST00000580751 M0QZK8 103 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 CHST1O43916 411 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 HPRT1P00492 218 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 MOSP00540 346 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 APOA2P02652 100 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 VDAC1P21796 283 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
SS18-216ENST00000580751 CYCSP99999 105 aaKnown RBP12.4□□□□□ -0.42
SS18-216ENST00000580751 RTL8BQ17RB0 113 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 FAM219AQ8IW50 185 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 LSM10Q969L4 123 aaKnown RBP12.4□□□□□ -0.42
SS18-216ENST00000580751 EAF1Q96JC9 268 aaPredicted RBP12.4□□□□□ -0.42
SS18-216ENST00000580751 RBM14Q96PK6 669 aaKnown RBP12.4□□□□□ -0.42
SS18-216ENST00000580751 SLC25A33Q9BSK2 321 aa12.4□□□□□ -0.42
SS18-216ENST00000580751 LINC00473A8K010 186 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 H0YJW9 148 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 PFDN1O60925 122 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 OR2A4O95047 310 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 HKR1P10072 659 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SLC25A6P12236 298 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
SS18-216ENST00000580751 FCN2Q15485 313 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SP6Q3SY56 376 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 ZNF585BQ52M93 769 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 AKAP14Q86UN6 197 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 PDPNQ86YL7 162 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SELENOHQ8IZQ5 122 aaKnown RBP12.39□□□□□ -0.43
SS18-216ENST00000580751 DRAXINQ8NBI3 349 aaPredicted RBP12.39□□□□□ -0.43
SS18-216ENST00000580751 OR8H1Q8NGG4 311 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 OR4C13Q8NGP0 309 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 OR5M8Q8NGP6 311 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 OR2A7Q96R45 310 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SPIN2AQ99865 258 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 RNF5Q99942 180 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 SPIN2BQ9BPZ2 258 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 C19orf24Q9BVV8 132 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 RANBP3Q9H6Z4 567 aaPredicted RBP12.39□□□□□ -0.43
SS18-216ENST00000580751 C1RLQ9NZP8 487 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 CACFD1Q9UGQ2 172 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 WASHC3Q9Y3C0 194 aa12.39□□□□□ -0.43
SS18-216ENST00000580751 H7C2Y5 167 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 NDUFA7O95182 113 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 GIPP09681 153 aaPredicted RBP12.38□□□□□ -0.43
SS18-216ENST00000580751 HNF4GQ14541 408 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 TMEM268Q5VZI3 342 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 Q8N6K4 173 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 UXS1Q8NBZ7 420 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 OR11H7Q8NGC8 314 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
SS18-216ENST00000580751 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
SS18-216ENST00000580751 FGF16O43320 207 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 CCNKO75909 580 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 LPAR6P43657 344 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 BRWD1-AS2P59051 145 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 FBLN7Q53RD9 439 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 GSG1LQ6UXU4 331 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
SS18-216ENST00000580751 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
SS18-216ENST00000580751 GPHA2Q96T91 129 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms