RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ELK1P19419 428 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 FXYD4P59646 89 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 HERV-K104P61576 105 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 EGFEM1PQ0D2K5 195 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 PJVKQ0ZLH3 352 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR2B11Q5JQS5 317 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 MFSD4AQ8N468 514 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR5H2Q8NGV7 314 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 TMEM68Q96MH6 324 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 SCPEP1Q9HB40 452 aa19.33■□□□□ 0.68
CDC42EP4-205ENST00000580315 SOX15O60248 233 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 NAT1P18440 290 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 KIR2DS2P43631 304 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 KIAA0141Q14154 515 aaPredicted RBP19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 SNX29P2Q8IUI4 249 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 DPF1Q92782 380 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 BORCS5Q969J3 196 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 GNB4Q9HAV0 340 aa19.32■□□□□ 0.68
CDC42EP4-205ENST00000580315 DNAH9Q9NYC9 4486 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 HOXD3P31249 432 aaPredicted RBP19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 RUNX1Q01196 453 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 EIF4EBP1Q13541 118 aaPredicted RBP19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 DYRK1AQ13627 763 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 PRSS8Q16651 343 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 CLVS1Q8IUQ0 354 aaPredicted RBP19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR11H1Q8NG94 326 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 GPX8Q8TED1 209 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 SLA2Q9H6Q3 261 aa19.31■□□□□ 0.68
CDC42EP4-205ENST00000580315 PMP2P02689 132 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 SAA1P0DJI8 122 aaPredicted RBP19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 RFX2P48378 723 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 TNXAQ16473 311 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 IDO2Q6ZQW0 420 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 TMEM17Q86X19 198 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR5B12Q96R08 314 aa19.3■□□□□ 0.68
CDC42EP4-205ENST00000580315 I3L521 148 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 TNFSF12O43508 249 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 ACTL6BO94805 426 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 SSBP2P81877 361 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 CATR1Q13166 79 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 DHRS11Q6UWP2 260 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR1N2Q8NGR9 330 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 VSTM2AQ8TAG5 236 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 CASTOR1Q8WTX7 329 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 RAB2BQ8WUD1 216 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 MS4A10Q96PG2 267 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 PHB2Q99623 299 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 ZNF2Q9BSG1 426 aaPredicted RBP19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 ZNF355PQ9NSJ1 428 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 ADAM30Q9UKF2 790 aa19.29■□□□□ 0.68
CDC42EP4-205ENST00000580315 H3BUA1 57 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 SULT1C2O00338 296 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 RPL5P46777 297 aaKnown RBP19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 TPPP2P59282 170 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 CD69Q07108 199 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 ZNF616Q08AN1 781 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 FHL3Q13643 280 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 MMD2Q8IY49 270 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 POC5Q8NA72 575 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR6F1Q8NGZ6 308 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 BCL7BQ9BQE9 202 aa19.28■□□□□ 0.68
CDC42EP4-205ENST00000580315 NOL3O60936 208 aaKnown RBP19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 HRASP01112 189 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR8U8P0C7N1 319 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 HLA-DMAP28067 261 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 RCVRNP35243 200 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 TMBIM6P55061 237 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 ZNF818PQ6ZRF7 136 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 OR5T1Q8NG75 326 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 MOB3AQ96BX8 217 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 GPHA2Q96T91 129 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 AIFM2Q9BRQ8 373 aa19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 ZNF430Q9H8G1 570 aaPredicted RBP19.27■□□□□ 0.68
CDC42EP4-205ENST00000580315 TRGV3P03979 118 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 LGALS1P09382 135 aaKnown RBP19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 HRH1P35367 487 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 SPCS2Q15005 226 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 MRGPRG-AS1Q2M3A8 158 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 LYSMD2Q8IV50 215 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 SPAG16Q8N0X2 631 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 C15orf40Q8WUR7 153 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 SRSF12Q8WXF0 261 aaKnown RBP19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 B9D2Q9BPU9 175 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 EXTL2Q9UBQ6 330 aa19.26■□□□□ 0.67
CDC42EP4-205ENST00000580315 MSGN1A6NI15 193 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 MPPED1O15442 326 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 RBFOX2O43251 390 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 TPPPO94811 219 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 OR2A4O95047 310 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 BRWD1-AS2P59051 145 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 TSPAN5P62079 268 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 VKORC1L1Q8N0U8 176 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 WWC2-AS2Q96NR7 200 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 OR2A7Q96R45 310 aa19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 ZMAT5Q9UDW3 170 aaKnown RBP19.25■□□□□ 0.67
CDC42EP4-205ENST00000580315 RGS5O15539 181 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 GNRHRP30968 328 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 AADACL3Q5VUY0 350 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 CMTM1Q8IZ96 169 aa19.24■□□□□ 0.67
CDC42EP4-205ENST00000580315 CD300LFQ8TDQ1 290 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms