RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TPPPO94811 219 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 SPNP16150 400 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 AADACP22760 399 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 HLA-DMAP28067 261 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 ACSM6Q6P461 480 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 FAM131AQ6UXB0 335 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 GLDNQ6ZMI3 551 aaPredicted RBP10.34□□□□□ -0.75
TRAF4-214ENST00000580073 SBSPONQ8IVN8 264 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 SGPP2Q8IWX5 399 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 EDARADDQ8WWZ3 215 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 GINS4Q9BRT9 223 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 SDHAF2Q9NX18 166 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
TRAF4-214ENST00000580073 RRHO14718 337 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 SPDEFO95238 335 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 HSPB1P04792 205 aaKnown RBP10.33□□□□□ -0.76
TRAF4-214ENST00000580073 CTXN2P0C2S0 81 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 FCGR2CP31995 323 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 SLURP1P55000 103 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 KIAA0141Q14154 515 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-214ENST00000580073 CDK10Q15131 360 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF79Q15937 498 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 CNPY1Q3B7I2 92 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 ACTBL2Q562R1 376 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 OVCH2Q7RTZ1 564 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF383Q8NA42 475 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 DRAXINQ8NBI3 349 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-214ENST00000580073 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-214ENST00000580073 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 RNF5Q99942 180 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 OR2D2Q9H210 308 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 MTFP1Q9UDX5 166 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 OR2W1Q9Y3N9 320 aa10.33□□□□□ -0.76
TRAF4-214ENST00000580073 H7C2Y5 167 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 M0QYG6 137 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 CTDSPLO15194 276 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 ZP3P21754 424 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 CNTFRP26992 372 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 HRH1P35367 487 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 TPPP2P59282 170 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 ARPC4P59998 168 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 EIF4EBP1Q13541 118 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-214ENST00000580073 IL18Q14116 193 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 DHRS11Q6UWP2 260 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 OR4D10Q8NGI6 311 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 ARPC1AQ92747 370 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
TRAF4-214ENST00000580073 IGHV4OR15-8A0A075B7B6 117 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 A0A087WW49 117 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 H3BUA1 57 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 GABARAPH6UMI1 98 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 RCVRNP35243 200 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 DYRK1AQ13627 763 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 PPP1R27Q86WC6 154 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 SMIM4Q8WVI0 70 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 GIMAP1Q8WWP7 306 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 GPHA2Q96T91 129 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 TSNAXQ99598 290 aaKnown RBP10.31□□□□□ -0.76
TRAF4-214ENST00000580073 TINAGL1Q9GZM7 467 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-214ENST00000580073 CCL28Q9NRJ3 127 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 EHFQ9NZC4 300 aa10.31□□□□□ -0.76
TRAF4-214ENST00000580073 RBMX2Q9Y388 322 aaKnown RBP10.31□□□□□ -0.76
TRAF4-214ENST00000580073 A0A0G2JLM5 398 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 LCE6AA0A183 80 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 LINC00473A8K010 186 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 A8MZ25 164 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 H0YJW9 148 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 M0R1X1 148 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 GSTZ1O43708 216 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-214ENST00000580073 PPYP01298 95 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 APOA2P02652 100 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 CD3DP04234 171 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 BRWD1-AS2P59051 145 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 RPL30P62888 115 aaKnown RBP10.3□□□□□ -0.76
TRAF4-214ENST00000580073 CX3CL1P78423 397 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 NDPQ00604 133 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 OR5AN1Q8NGI8 311 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 FCAMRQ8WWV6 532 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 SDHCQ99643 169 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-214ENST00000580073 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 TM2D3Q9BRN9 247 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 RSRP1Q9BUV0 290 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 FXYD6Q9H0Q3 95 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 ALX4Q9H161 411 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-214ENST00000580073 FBXL15Q9H469 300 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF221Q9UK13 617 aa10.3□□□□□ -0.76
TRAF4-214ENST00000580073 HUWE1Q7Z6Z7 4374 aaKnown RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 C13orf42A0A1B0GVH6 325 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 H0Y980 276 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 TRGV3P03979 118 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 CD74P04233 296 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ZNF735P0CB33 412 aa10.29□□□□□ -0.76
TRAF4-214ENST00000580073 DUTP33316 252 aaKnown RBP10.29□□□□□ -0.76
TRAF4-214ENST00000580073 ETV6P41212 452 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms