RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ERICH4A6NGS2 130 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TRDCB7Z8K6 153 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 WBP4O75554 376 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 DIRAS3O95661 229 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 DHFRP00374 187 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 GSTT2P0CG29 244 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 GSTT2BP0CG30 244 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 UNC119Q13432 240 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MED22Q15528 200 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SMN1Q16637 294 aaKnown RBP9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZFP1Q6P2D0 407 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR2C3Q8N628 320 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZNF485Q8NCK3 441 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR4A4PQ8NGN8 299 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CACNG8Q8WXS5 425 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 GGHQ92820 318 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SPAG8Q99932 426 aaPredicted RBP9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
CDK5RAP3-216ENST00000579853 IGKV1-6A0A0C4DH72 117 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 DPPA5A6NC42 116 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TMEM14DPA8MWL7 114 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CRYZL1O95825 349 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CELP19835 753 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 EDN2P20800 178 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 GALP22466 123 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MRPS15P82914 257 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CDK10Q15131 360 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 BTNL8Q6UX41 500 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR10J5Q8NHC4 309 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CMSS1Q9BQ75 279 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 HDHD3Q9BSH5 251 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CENPOQ9BU64 300 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZNF430Q9H8G1 570 aaPredicted RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 FBXL7Q9UJT9 491 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 RBM7Q9Y580 266 aaKnown RBP9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PNMA8CA0A1B0GUJ8 204 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 EFCAB10A6NFE3 127 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 NPIPB5A8MRT5 1133 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 BET1O15155 118 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MYOD1P15172 320 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 RANBP1P43487 201 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ELLP55199 621 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 IDO2Q6ZQW0 420 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZNF555Q8NEP9 628 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR6M1Q8NGM8 313 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 EEF1AKMT3Q96AZ1 226 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C6orf62Q9GZU0 229 aaPredicted RBP9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 LPAR5Q9H1C0 372 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 UFC1Q9Y3C8 167 aa9.05□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PKD1P98161 4303 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 A0A0A6YYD4 124 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TRBV7-1A0A0A6YYK4 115 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SOCS1O15524 211 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 FABP7O15540 132 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 PSMB6P28072 239 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 QRFPP83859 136 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 RBMS2Q15434 407 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SSX1Q16384 188 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 RBM48Q5RL73 367 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 LAMTOR1Q6IAA8 161 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C11orf45Q8TAV5 145 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C2CD4CQ8TF44 421 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 FBLIM1Q8WUP2 373 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 GALNT14Q96FL9 552 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CABLES2Q9BTV7 478 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 C5orf66Q9H5L9 145 aa9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TRBV6-7A0A0A0MS04 114 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 TSPAN4O14817 238 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MYL12BO14950 172 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SAA1P0DJI8 122 aaPredicted RBP9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CD37P11049 281 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 MAS1LP35410 378 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ST3GAL4Q11206 333 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ZNF585BQ52M93 769 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ACSM3Q53FZ2 586 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CEACAM19Q7Z692 300 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 ARHGAP5-AS1Q96IT6 56 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 CXorf58Q96LI9 332 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 FYTTD1Q96QD9 318 aaKnown RBP9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 SELENOKQ9Y6D0 94 aa9.03□□□□□ -0.96
CDK5RAP3-216ENST00000579853 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
CDK5RAP3-216ENST00000579853 FOXI3A8MTJ6 420 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms