RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 PLGRKTQ9HBL7 147 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 SLC25A37Q9NYZ2 338 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 VAPAQ9P0L0 249 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 DUX4Q9UBX2 424 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 SIGLEC7Q9Y286 467 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 HILPDAQ9Y5L2 63 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 LINC00312Q9Y6C7 94 aa3.88□□□□□ -1.79
PTPRM-208ENST00000578600 IGKV1D-17A0A075B6S4 117 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 IGHV2-26A0A0B4J1V2 119 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 SERTM2A0A1B0GWG4 89 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 FAM168BA1KXE4 195 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RFPL4AA6NLU0 287 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RFPL4AL1F8VTS6 287 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 H7C1C5 153 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CXCR6O00574 342 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 PHOX2AO14813 284 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CASQ2O14958 399 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-208ENST00000578600 AKR7A2O43488 359 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 MPZL2O60487 215 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 LY6G6CO95867 125 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 IGHG2P01859 326 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 SHBGP04278 402 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 GIG44P09565 113 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CD40LGP29965 261 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 FMO3P31513 532 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 VHLP40337 213 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 GLP1RP43220 463 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RAB7AP51149 207 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 SLC18A1P54219 525 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CDC42P60953 191 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 LCN6P62502 163 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RUNX1Q01196 453 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 ZNF616Q08AN1 781 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
PTPRM-208ENST00000578600 TEX30Q5JUR7 227 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 GLYATL3Q5SZD4 288 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 Q8IYB0 196 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 STPG2Q8N412 459 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 OR4M1Q8NGD0 313 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 OR8J3Q8NGG0 315 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RPEQ96AT9 228 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 TAMM41Q96BW9 452 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 FLYWCH2Q96CP2 140 aaKnown RBP3.87□□□□□ -1.79
PTPRM-208ENST00000578600 PKNOX2Q96KN3 472 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 UBE2E2Q96LR5 201 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CGREF1Q99674 301 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 TMEM109Q9BVC6 243 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 RNF167Q9H6Y7 350 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 C19orf12Q9NSK7 152 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 CCDC167Q9P0B6 97 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 KIF25Q9UIL4 384 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 PYCARDQ9ULZ3 195 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 VSIG4Q9Y279 399 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 IER3IP1Q9Y5U9 82 aa3.87□□□□□ -1.79
PTPRM-208ENST00000578600 TRGV10A0A0A0MS01 117 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ARRDC5A6NEK1 342 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 GOSR2O14653 212 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OVOL1O14753 267 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 FCN3O75636 299 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 CYB5AP00167 134 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 HSPB1P04792 205 aaKnown RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ERP29P30040 261 aaKnown RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 EDDM3BP56851 147 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 TCTAP57738 103 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 PRDX4Q13162 271 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 IL18Q14116 193 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 DGCR6Q14129 220 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ACP7Q6ZNF0 438 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 LINC00336Q6ZUF6 198 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ZNF546Q86UE3 836 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 RBM45Q8IUH3 476 aaKnown RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 LINC00471Q8N535 108 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ZNF565Q8N9K5 539 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 PROKR2Q8NFJ6 384 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 BBS1Q8NFJ9 593 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR11H1Q8NG94 326 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR4C5Q8NGB2 326 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR52L1Q8NGH7 329 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR4D6Q8NGJ1 314 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR51S1Q8NGJ8 323 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR1N2Q8NGR9 330 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR2AE1Q8NHA4 323 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 PLPPR1Q8TBJ4 325 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 HAVCR2Q8TDQ0 301 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 SGK3Q96BR1 496 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ERMAPQ96PL5 475 aaPredicted RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR8B4Q96RC9 309 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 PAIP2Q9BPZ3 127 aaKnown RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 WFDC6Q9BQY6 131 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 PYGO2Q9BRQ0 406 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 C20orf24Q9BUV8 137 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 OR51I2Q9H344 312 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 RPRD1BQ9NQG5 326 aaKnown RBP3.86□□□□□ -1.79
PTPRM-208ENST00000578600 NKIRAS1Q9NYS0 192 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 ZNF222Q9UK12 451 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 BAIAP2Q9UQB8 552 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 SLC22A13Q9Y226 551 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 RHBDD3Q9Y3P4 386 aa3.86□□□□□ -1.79
PTPRM-208ENST00000578600 IGKV3D-20A0A0C4DH25 116 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms