RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 KIR2DS2P43631 304 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 CDX1P47902 265 aaPredicted RBP15.22■□□□□ 0.03
SS18-209ENST00000578595 ETV3LQ6ZN32 361 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 ZNF818PQ6ZRF7 136 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 SSX9Q7RTT3 188 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 VKORC1L1Q8N0U8 176 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 SPAG16Q8N0X2 631 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 ZBTB34Q8NCN2 500 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 MS4A10Q96PG2 267 aa15.22■□□□□ 0.03
SS18-209ENST00000578595 CCL24O00175 119 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 CTDSP2O14595 271 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 MYCNOSP40205 109 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 CRIP2P52943 208 aaPredicted RBP15.21■□□□□ 0.03
SS18-209ENST00000578595 TPPP2P59282 170 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 MRPL41Q8IXM3 137 aaKnown RBP15.21■□□□□ 0.03
SS18-209ENST00000578595 RNF152Q8N8N0 203 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 TEX45Q8NA69 505 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 POC5Q8NA72 575 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 MINDY2Q8NBR6 621 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 OR5M8Q8NGP6 311 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 DYNC2LI1Q8TCX1 351 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 C15orf40Q8WUR7 153 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 C4orf3Q8WVX3 66 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 FXYD6Q9H0Q3 95 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 MIXL1Q9H2W2 232 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 VSIG4Q9Y279 399 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 NUBP2Q9Y5Y2 271 aa15.21■□□□□ 0.03
SS18-209ENST00000578595 M0QYG6 137 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 SOX15O60248 233 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 IGLV1-40P01703 118 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 RLN1P04808 185 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 CRYGBP07316 175 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 EGR2P11161 476 aaPredicted RBP15.2■□□□□ 0.02
SS18-209ENST00000578595 RAB9AP51151 201 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 MSMO1Q15800 293 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 AKIRIN2Q53H80 203 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 SAMD5Q5TGI4 173 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 PYHIN1Q6K0P9 492 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 LYSMD2Q8IV50 215 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 LINC00482Q8N8I6 264 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 OR5T1Q8NG75 326 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 OR52I2Q8NH67 350 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 FCAMRQ8WWV6 532 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 MOB3AQ96BX8 217 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 DIRAS2Q96HU8 199 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 RAX2Q96IS3 184 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 GNB4Q9HAV0 340 aa15.2■□□□□ 0.02
SS18-209ENST00000578595 HRASP01112 189 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 TRGV3P03979 118 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 IFNA6P05013 189 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 EIF4EBP1Q13541 118 aaPredicted RBP15.19■□□□□ 0.02
SS18-209ENST00000578595 IL18Q14116 193 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 PRSS8Q16651 343 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 RNASE10Q5GAN6 216 aaKnown RBP15.19■□□□□ 0.02
SS18-209ENST00000578595 CMTM1Q8IZ96 169 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 ZNF491Q8N8L2 437 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 VSTM2AQ8TAG5 236 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 SRSF12Q8WXF0 261 aaKnown RBP15.19■□□□□ 0.02
SS18-209ENST00000578595 RCC1LQ96I51 464 aaKnown RBP15.19■□□□□ 0.02
SS18-209ENST00000578595 UBE2E2Q96LR5 201 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 ZNF430Q9H8G1 570 aaPredicted RBP15.19■□□□□ 0.02
SS18-209ENST00000578595 COA4Q9NYJ1 87 aa15.19■□□□□ 0.02
SS18-209ENST00000578595 RAMP3O60896 148 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 S100GP29377 79 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 PHLDA2Q53GA4 152 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 C19orf54Q5BKX5 351 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 DHRS11Q6UWP2 260 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 MMD2Q8IY49 270 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 OR11H1Q8NG94 326 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 MCFD2Q8NI22 146 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 DPF1Q92782 380 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 ABHD1Q96SE0 405 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 HRASLSQ9HDD0 168 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 KLK11Q9UBX7 282 aa15.18■□□□□ 0.02
SS18-209ENST00000578595 MSGN1A6NI15 193 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 GPR31O00270 319 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 OR2A4O95047 310 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 IGHV3-11P01762 117 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 PRB2P02812 416 aaPredicted RBP15.17■□□□□ 0.02
SS18-209ENST00000578595 GNRHRP30968 328 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 SSBP2P81877 361 aaPredicted RBP15.17■□□□□ 0.02
SS18-209ENST00000578595 BEAN1Q3B7T3 259 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 C10orf55Q5SWW7 151 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 RHOVQ96L33 236 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 OR2A7Q96R45 310 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 P2RX4Q99571 388 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 SLA2Q9H6Q3 261 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 CEPT1Q9Y6K0 416 aa15.17■□□□□ 0.02
SS18-209ENST00000578595 KBTBD11O94819 623 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 DUS4LO95620 317 aaKnown RBP15.16■□□□□ 0.02
SS18-209ENST00000578595 PGAM2P15259 253 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 RPA2P15927 270 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 DGCR2P98153 550 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 WFDC9Q8NEX5 89 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 DMBX1Q8NFW5 382 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 MYOZ3Q8TDC0 251 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 AIFM2Q9BRQ8 373 aa15.16■□□□□ 0.02
SS18-209ENST00000578595 TINAGL1Q9GZM7 467 aaPredicted RBP15.16■□□□□ 0.02
SS18-209ENST00000578595 ALX4Q9H161 411 aaPredicted RBP15.16■□□□□ 0.02
SS18-209ENST00000578595 HPRT1P00492 218 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms