RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 SLA2Q9H6Q3 261 aa10.61□□□□□ -0.71
CSNK1D-208ENST00000578501 EHFQ9NZC4 300 aa10.61□□□□□ -0.71
CSNK1D-208ENST00000578501 A3GALT2U3KPV4 340 aa10.61□□□□□ -0.71
CSNK1D-208ENST00000578501 H3BUA1 57 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 BRI3O95415 125 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 RFX2P48378 723 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 TMBIM6P55061 237 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 FOXB2Q5VYV0 432 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 LYSMD2Q8IV50 215 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 GRPEL2Q8TAA5 225 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 MOB3AQ96BX8 217 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 GNB4Q9HAV0 340 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 CCL28Q9NRJ3 127 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 TAS2R8Q9NYW2 309 aa10.6□□□□□ -0.71
CSNK1D-208ENST00000578501 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.713e-9■■■■■ 32.5
CSNK1D-208ENST00000578501 SAA1P0DJI8 122 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 RCVRNP35243 200 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 HERV-K104P61576 105 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 GNB1P62873 340 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 DEFB136Q30KP8 78 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 CLVS1Q8IUQ0 354 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 MMD2Q8IY49 270 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
CSNK1D-208ENST00000578501 FAM25AB3EWG3 89 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 FAM25CB3EWG5 89 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 FAM25GB3EWG6 89 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 HRASP01112 189 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 PMP2P02689 132 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 GNRHRP30968 328 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 HRH1P35367 487 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 FXYD4P59646 89 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 CATR1Q13166 79 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 SPCS2Q15005 226 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 IDO2Q6ZQW0 420 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 ZNF818PQ6ZRF7 136 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 SNX29P2Q8IUI4 249 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 OR1N2Q8NGR9 330 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 OR6F1Q8NGZ6 308 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 C15orf40Q8WUR7 153 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 ZNF430Q9H8G1 570 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
CSNK1D-208ENST00000578501 MSGN1A6NI15 193 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 TNFSF12O43508 249 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 ACTL6BO94805 426 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 OR2A4O95047 310 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 HLA-DMAP28067 261 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 ZNF616Q08AN1 781 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 TNXAQ16473 311 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 TMEM17Q86X19 198 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 POC5Q8NA72 575 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 CD300LFQ8TDQ1 290 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 RHOVQ96L33 236 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 OR2A7Q96R45 310 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 GPHA2Q96T91 129 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 CCDC59Q9P031 241 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 EXTL2Q9UBQ6 330 aa10.57□□□□□ -0.72
CSNK1D-208ENST00000578501 RAMP3O60896 148 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 KBTBD11O94819 623 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 HPRT1P00492 218 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 TRGV3P03979 118 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 MAS1LP35410 378 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 RAB25P57735 213 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 TPPP2P59282 170 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 TAS2R31P59538 309 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 CMTM1Q8IZ96 169 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 VKORC1L1Q8N0U8 176 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 SPAG16Q8N0X2 631 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 OR5T1Q8NG75 326 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 OR4A5Q8NH83 315 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 CASTOR1Q8WTX7 329 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 DPF1Q92782 380 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 MS4A10Q96PG2 267 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 PHB2Q99623 299 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 SPIN2AQ99865 258 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 SPIN2BQ9BPZ2 258 aa10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 AURKAIP1Q9NWT8 199 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 ZMAT5Q9UDW3 170 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-208ENST00000578501 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
CSNK1D-208ENST00000578501 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-208ENST00000578501 FGF2P09038 288 aa10.55□□□□□ -0.72
CSNK1D-208ENST00000578501 TSPAN5P62079 268 aa10.55□□□□□ -0.72
CSNK1D-208ENST00000578501 LPCAT3Q6P1A2 487 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms