RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 GCSAMLQ5JQS6 135 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CENPVQ7Z7K6 275 aaPredicted RBP14.5□□□□□ -0.09
ERBB2-205ENST00000578199 OR4A16Q8NH70 328 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CT45A3Q8NHU0 189 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 FAM57AQ8TBR7 257 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CIB3Q96Q77 187 aaPredicted RBP14.5□□□□□ -0.09
ERBB2-205ENST00000578199 ZNF251Q9BRH9 671 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 TIMM9Q9Y5J7 89 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 MUC6Q6W4X9 2439 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CRYABP02511 175 aaKnown RBP14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CD40P25942 277 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CCKARP32238 428 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 CD81P60033 236 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 ZNF674Q2M3X9 581 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 FAM216BQ8N7L0 139 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 SFXN3Q9BWM7 321 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 RNF7Q9UBF6 113 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 DSCAML1Q8TD84 2053 aa14.5□□□□□ -0.09
ERBB2-205ENST00000578199 RRHO14718 337 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 CGB3P0DN86 165 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 CGB7P0DN87 165 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 MAS1LP35410 378 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 CCL8P80075 99 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 SLC16A13Q7RTY0 426 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 ABHD12Q8N2K0 398 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 ABHD17AQ96GS6 310 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 S1PR3Q99500 378 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 ZNRD1Q9P1U0 126 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 A0A087WWC5 75 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 MMP23AO75900 390 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 IFNA10P01566 189 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 SMIM6P0DI80 62 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 GNG10P50151 68 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 MALSU1Q96EH3 234 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 SSX3Q99909 188 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 DYSFO75923 2080 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 APC2O95996 2303 aa14.49□□□□□ -0.09
ERBB2-205ENST00000578199 SMCO3A2RU48 225 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 UBE2CO00762 179 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 GATCO43716 136 aaKnown RBP14.48□□□□□ -0.09
ERBB2-205ENST00000578199 GNB2P62879 340 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 TCF23Q7RTU1 214 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 CISD2Q8N5K1 135 aaKnown RBP14.48□□□□□ -0.09
ERBB2-205ENST00000578199 RAB24Q969Q5 203 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 CUL9Q8IWT3 2517 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 SAA2-SAA4A0A096LPE2 208 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 A0A0G2JNJ9 132 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 SAA2P0DJI9 122 aaPredicted RBP14.48□□□□□ -0.09
ERBB2-205ENST00000578199 NCMAPQ5T1S8 102 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 DOLPP1Q86YN1 238 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 ZNF709Q8N972 641 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 SDF2L1Q9HCN8 221 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 HEYLQ9NQ87 328 aaPredicted RBP14.48□□□□□ -0.09
ERBB2-205ENST00000578199 TMEM140Q9NV12 185 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 Q9UFV3 132 aa14.48□□□□□ -0.09
ERBB2-205ENST00000578199 CYB5BO43169 146 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 IGHV2-5P01817 119 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 MYOD1P15172 320 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 RELBQ01201 579 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 LYG1Q8N1E2 194 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 Q8N7P7 452 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 RPUSD4Q96CM3 377 aaKnown RBP14.47□□□□□ -0.09
ERBB2-205ENST00000578199 GAFA1Q96PS6 74 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 TANC2Q9HCD6 1990 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 KBTBD11-OT1A0A1B0GTJ5 212 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 COL8A2P25067 703 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 CD1BP29016 333 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 SELENOVP59797 346 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 MEF2BQ02080 365 aaPredicted RBP14.47□□□□□ -0.09
ERBB2-205ENST00000578199 VWC2Q2TAL6 325 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 WDR25Q64LD2 544 aaPredicted RBP14.47□□□□□ -0.09
ERBB2-205ENST00000578199 STUMQ69YW2 141 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 WFDC8Q8IUA0 241 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 GFOD1Q9NXC2 390 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 IL19Q9UHD0 177 aa14.47□□□□□ -0.09
ERBB2-205ENST00000578199 TRAV38-1A0A0B4J264 116 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 CTXND1A0A1B0GTU2 59 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 IFNA1P01562 189 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 MDKP21741 143 aaPredicted RBP14.46□□□□□ -0.09
ERBB2-205ENST00000578199 GATA4P43694 442 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 FAM222BQ8WU58 562 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 DDB2Q92466 427 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 P2RX4Q99571 388 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 TP53TG5Q9Y2B4 290 aa14.46□□□□□ -0.09
ERBB2-205ENST00000578199 ERVK-16P61578 105 aa14.46□□□□□ -0.1
ERBB2-205ENST00000578199 KRTCAP3Q53RY4 240 aa14.46□□□□□ -0.1
ERBB2-205ENST00000578199 TMEM170AQ8WVE7 144 aa14.46□□□□□ -0.1
ERBB2-205ENST00000578199 NIT2Q9NQR4 276 aa14.46□□□□□ -0.1
ERBB2-205ENST00000578199 SPCS3P61009 180 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 SDSLQ96GA7 329 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 SMIM7Q9BQ49 75 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 ACTR3CQ9C0K3 210 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-205ENST00000578199 PATZ1Q9HBE1 687 aaKnown RBP14.45□□□□□ -0.1
ERBB2-205ENST00000578199 CEP295Q9C0D2 2601 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 TRGV10A0A0A0MS01 117 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 PAGE4O60829 102 aa14.45□□□□□ -0.1
ERBB2-205ENST00000578199 S100A9P06702 114 aaKnown RBP14.45□□□□□ -0.1
ERBB2-205ENST00000578199 VDAC2P45880 294 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-205ENST00000578199 KIAA0141Q14154 515 aaPredicted RBP14.45□□□□□ -0.1
ERBB2-205ENST00000578199 C3orf36Q3SXR2 165 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms