RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 BIVMQ86UB2 503 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TRBV6-7A0A0A0MS04 114 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TRBV23-1A0A0A0MS06 115 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR11H12B2RN74 326 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR11H1Q8NG94 326 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR11H2Q8NH07 326 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 CTAG1AP78358 180 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 SNAI3Q3KNW1 292 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 LY6G6FQ5SQ64 297 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 ATRAIDQ6UW56 229 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 NIT1Q86X76 327 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR9G1Q8NH87 305 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TMSB15BA0A087X1C1 80 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TRIP6Q15654 476 aaKnown RBP9.17□□□□□ -0.94
SEC22B-201ENST00000578049 SCN3AQ9NY46 2000 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 hCG_38984A0A1B0GV85 526 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 TCF23Q7RTU1 214 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 IMMP2LQ96T52 175 aa9.17□□□□□ -0.94
SEC22B-201ENST00000578049 ATP5LO75964 103 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 SMRP1Q8NCR6 262 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 PTPRFP10586 1907 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 KRTCAP3Q53RY4 240 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 CBLN1P23435 193 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 C2orf83Q53S99 150 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF841Q6ZN19 808 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
SEC22B-201ENST00000578049 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 SRSF12Q8WXF0 261 aaKnown RBP9.16□□□□□ -0.94
SEC22B-201ENST00000578049 METTL26Q96S19 204 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 MRPS16Q9Y3D3 137 aaKnown RBP9.16□□□□□ -0.94
SEC22B-201ENST00000578049 FAM90A1Q86YD7 464 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
SEC22B-201ENST00000578049 J3QRE1 110 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 ZNF525Q8N782 197 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 GRIFINA4D1Z8 144 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 CD5P06127 495 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 KCNS1Q96KK3 526 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 PGLYRP4Q96LB8 373 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 TBL2Q9Y4P3 447 aaKnown RBP9.15□□□□□ -0.94
SEC22B-201ENST00000578049 LOC102724200A0A096LPH7 203 aaPredicted RBP9.15□□□□□ -0.94
SEC22B-201ENST00000578049 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 IL4P05112 153 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 IL6RP08887 468 aaPredicted RBP9.15□□□□□ -0.94
SEC22B-201ENST00000578049 CCL1P22362 96 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 ANOS1P23352 680 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
SEC22B-201ENST00000578049 WNT9BO14905 357 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 SSTR5P35346 364 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 SLC22A18ASQ8N1D0 253 aa9.15□□□□□ -0.94
SEC22B-201ENST00000578049 SLC25A53Q5H9E4 307 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 TTC32Q5I0X7 151 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 LOC389332A0A1B0GUA5 103 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 AGFG2O95081 481 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.95
SEC22B-201ENST00000578049 NR2C2APQ86WQ0 139 aa9.15□□□□□ -0.95
SEC22B-201ENST00000578049 UNC13CQ8NB66 2214 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 IGKV3D-11A0A0A0MRZ8 115 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CTSSP25774 331 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 TBR1Q16650 682 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 TMEM106BQ9NUM4 274 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 FXYD3Q14802 87 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 C3AR1Q16581 482 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CCL13Q99616 98 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 HS3ST3B1Q9Y662 390 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CDX4O14627 284 aaPredicted RBP9.14□□□□□ -0.95
SEC22B-201ENST00000578049 FAM106CPP0CH98 169 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 C1orf185Q5T7R7 199 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 DEFB123Q8N688 67 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CLDN16Q9Y5I7 305 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 SPTBP11277 2137 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 A0A1B0GUT8 65 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 ID3Q02535 119 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 RELQ04864 619 aaPredicted RBP9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CIARTQ8N365 385 aaPredicted RBP9.14□□□□□ -0.95
SEC22B-201ENST00000578049 OSTCQ9NRP0 149 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 TM4SF5O14894 197 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
SEC22B-201ENST00000578049 NUDT3O95989 172 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 RPL23P62829 140 aaKnown RBP9.14□□□□□ -0.95
SEC22B-201ENST00000578049 CCL20P78556 96 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 ZNF441Q8N8Z8 693 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 IFI27L2Q9H2X8 130 aa9.14□□□□□ -0.95
SEC22B-201ENST00000578049 ALPK2Q86TB3 2170 aa9.13□□□□□ -0.95
SEC22B-201ENST00000578049 SS18L1O75177 396 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms