RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
SREBF1-217ENST00000577897 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
SREBF1-217ENST00000577897 RNF150Q9ULK6 438 aa11.44□□□□□ -0.58
SREBF1-217ENST00000577897 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
SREBF1-217ENST00000577897 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
SREBF1-217ENST00000577897 LINC00862A6NCI5 91 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 H0YIZ8 118 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 TIMM23O14925 209 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 RAB29O14966 203 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 IGHV2-5P01817 119 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 TFF1P04155 84 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 GAPDHP04406 335 aaKnown RBP11.43□□□□□ -0.58
SREBF1-217ENST00000577897 CGB3P0DN86 165 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 CGB7P0DN87 165 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 GATA3P23771 443 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 LPAR6P43657 344 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 ERVK-16P61578 105 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
SREBF1-217ENST00000577897 BAXQ07812 192 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 LTC4SQ16873 150 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 FAM201AQ5SY85 155 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 SPAG16Q8N0X2 631 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 RAB1CQ92928 201 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
SREBF1-217ENST00000577897 RCL1Q9Y2P8 373 aaKnown RBP11.43□□□□□ -0.58
SREBF1-217ENST00000577897 TANC2Q9HCD6 1990 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 IGHV3-43A0A0B4J1X8 118 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 A0A1W2PR64 198 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 RBFOX2O43251 390 aaKnown RBP eCLIP11.42□□□□□ -0.58
SREBF1-217ENST00000577897 HPRT1P00492 218 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 IGLV2-14P01704 120 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 IGHV3-43DP0DP04 118 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 THBS3P49746 956 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 ID3Q02535 119 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 STX12Q86Y82 276 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 H1FXQ92522 213 aaKnown RBP11.42□□□□□ -0.58
SREBF1-217ENST00000577897 SDHAF2Q9NX18 166 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 MIOXQ9UGB7 285 aa11.42□□□□□ -0.58
SREBF1-217ENST00000577897 KIAA2026Q5HYC2 2103 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 FAM90A9PA6NNJ1 464 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 TOR1AO14656 332 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 ST8SIA5O15466 376 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 PRB2P02812 416 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-217ENST00000577897 NFYBP25208 207 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 IL3RAP26951 378 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 LOXL3P58215 753 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 ZNF266Q14584 549 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 C17orf58Q2M2W7 97 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 ALKAL2Q6UX46 152 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 H2BFWTQ7Z2G1 175 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 FGFRL1Q8N441 504 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 OR2C3Q8N628 320 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 RNF141Q8WVD5 230 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 GPR146Q96CH1 333 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 CLCC1Q96S66 551 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 CITED1Q99966 193 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-217ENST00000577897 MED9Q9NWA0 146 aa11.41□□□□□ -0.58
SREBF1-217ENST00000577897 CLDN34H7C241 214 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 M0R1X1 148 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 SSSCA1O60232 199 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 CFDP00746 253 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 RRASP10301 218 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 CAV2P51636 162 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 TAS2R30P59541 319 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 HOXA4Q00056 320 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 OR4S2Q8NH73 311 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 CIB3Q96Q77 187 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 AGMATQ9BSE5 352 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.58
SREBF1-217ENST00000577897 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.58
SREBF1-217ENST00000577897 A0A1B0GUS0 222 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 NUDT19A8MXV4 375 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 DVL1O14640 695 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 SYNGR2O43760 224 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 PITX3O75364 302 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 RBMXL2O75526 392 aaKnown RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 DFFBO76075 338 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 TSPAN15O95858 294 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 DUTP33316 252 aaKnown RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 RPP30P78346 268 aaKnown RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 EIF4EBP1Q13541 118 aaPredicted RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 KLF17Q5JT82 389 aaPredicted RBP11.39□□□□□ -0.59
SREBF1-217ENST00000577897 FAM71F2Q6NXP2 309 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
SREBF1-217ENST00000577897 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms