RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ABHD5Q8WTS1 349 aa15.08■□□□□ 0
SS18-208ENST00000577751 FCAMRQ8WWV6 532 aa15.08■□□□□ 0
SS18-208ENST00000577751 DIRAS2Q96HU8 199 aa15.08■□□□□ 0
SS18-208ENST00000577751 DCUN1D5Q9BTE7 237 aa15.08■□□□□ 0
SS18-208ENST00000577751 FXYD6Q9H0Q3 95 aa15.08■□□□□ 0
SS18-208ENST00000577751 RABL2AQ9UBK7 228 aaPredicted RBP15.08■□□□□ 0
SS18-208ENST00000577751 RSL24D1Q9UHA3 163 aaKnown RBP15.08■□□□□ 0
SS18-208ENST00000577751 RABL2BQ9UNT1 228 aa15.08■□□□□ 0
SS18-208ENST00000577751 A0A1W2PN81 502 aa15.07■□□□□ 0
SS18-208ENST00000577751 CTDSPLO15194 276 aa15.07■□□□□ 0
SS18-208ENST00000577751 RBFOX2O43251 390 aaKnown RBP eCLIP15.07■□□□□ 0
SS18-208ENST00000577751 SAA1P0DJI8 122 aaPredicted RBP15.07■□□□□ 0
SS18-208ENST00000577751 CHRNA7P36544 502 aa15.07■□□□□ 0
SS18-208ENST00000577751 TSPAN5P62079 268 aa15.07■□□□□ 0
SS18-208ENST00000577751 CATR1Q13166 79 aa15.07■□□□□ 0
SS18-208ENST00000577751 PRSS8Q16651 343 aa15.07■□□□□ 0
SS18-208ENST00000577751 IDO2Q6ZQW0 420 aa15.07■□□□□ 0
SS18-208ENST00000577751 C8orf86Q6ZUL3 223 aa15.07■□□□□ 0
SS18-208ENST00000577751 KLHL30-AS1Q8NEE0 82 aa15.07■□□□□ 0
SS18-208ENST00000577751 C6orf62Q9GZU0 229 aaPredicted RBP15.07■□□□□ 0
SS18-208ENST00000577751 FOXA2Q9Y261 457 aaPredicted RBP15.07■□□□□ 0
SS18-208ENST00000577751 TNCP24821 2201 aa15.07■□□□□ 0
SS18-208ENST00000577751 CCDC160A6NGH7 325 aa15.06■□□□□ 0
SS18-208ENST00000577751 NUDT19A8MXV4 375 aa15.06■□□□□ 0
SS18-208ENST00000577751 RAMP3O60896 148 aa15.06■□□□□ 0
SS18-208ENST00000577751 PGLYRP1O75594 196 aaPredicted RBP15.06■□□□□ 0
SS18-208ENST00000577751 CNIH1O95406 144 aa15.06■□□□□ 0
SS18-208ENST00000577751 PF4P02776 101 aa15.06■□□□□ 0
SS18-208ENST00000577751 RAB9AP51151 201 aa15.06■□□□□ 0
SS18-208ENST00000577751 DGCR2P98153 550 aa15.06■□□□□ 0
SS18-208ENST00000577751 TMEM65Q6PI78 240 aa15.06■□□□□ 0
SS18-208ENST00000577751 UNQ5815/PRO19632Q6UWF5 114 aa15.06■□□□□ 0
SS18-208ENST00000577751 SPAG16Q8N0X2 631 aa15.06■□□□□ 0
SS18-208ENST00000577751 ZNF491Q8N8L2 437 aa15.06■□□□□ 0
SS18-208ENST00000577751 OR5M8Q8NGP6 311 aa15.06■□□□□ 0
SS18-208ENST00000577751 MCFD2Q8NI22 146 aa15.06■□□□□ 0
SS18-208ENST00000577751 UBE2E2Q96LR5 201 aa15.06■□□□□ 0
SS18-208ENST00000577751 SOSTQ9BQB4 213 aa15.06■□□□□ 0
SS18-208ENST00000577751 A3GALT2U3KPV4 340 aa15.06■□□□□ 0
SS18-208ENST00000577751 CD3DP04234 171 aa15.05■□□□□ -0
SS18-208ENST00000577751 TBPP20226 339 aa15.05■□□□□ -0
SS18-208ENST00000577751 TNFSF8P32971 234 aa15.05■□□□□ -0
SS18-208ENST00000577751 MYCNOSP40205 109 aa15.05■□□□□ -0
SS18-208ENST00000577751 UCP3P55916 312 aa15.05■□□□□ -0
SS18-208ENST00000577751 GNB1P62873 340 aa15.05■□□□□ -0
SS18-208ENST00000577751 SSBP1Q04837 148 aaKnown RBP15.05■□□□□ -0
SS18-208ENST00000577751 AADACL3Q5VUY0 350 aa15.05■□□□□ -0
SS18-208ENST00000577751 PUSL1Q8N0Z8 303 aaKnown RBP15.05■□□□□ -0
SS18-208ENST00000577751 TMEM229BQ8NBD8 167 aa15.05■□□□□ -0
SS18-208ENST00000577751 GRPEL2Q8TAA5 225 aa15.05■□□□□ -0
SS18-208ENST00000577751 SMIM4Q8WVI0 70 aa15.05■□□□□ -0
SS18-208ENST00000577751 TMEM68Q96MH6 324 aa15.05■□□□□ -0
SS18-208ENST00000577751 P2RX4Q99571 388 aa15.05■□□□□ -0
SS18-208ENST00000577751 TINAGL1Q9GZM7 467 aaPredicted RBP15.05■□□□□ -0
SS18-208ENST00000577751 ZNF430Q9H8G1 570 aaPredicted RBP15.05■□□□□ -0
SS18-208ENST00000577751 M0QYG6 137 aa15.04■□□□□ -0
SS18-208ENST00000577751 GPR31O00270 319 aa15.04■□□□□ -0
SS18-208ENST00000577751 OR2A4O95047 310 aa15.04■□□□□ -0
SS18-208ENST00000577751 HRASP01112 189 aa15.04■□□□□ -0
SS18-208ENST00000577751 CD74P04233 296 aa15.04■□□□□ -0
SS18-208ENST00000577751 IL18Q14116 193 aa15.04■□□□□ -0
SS18-208ENST00000577751 RNASE10Q5GAN6 216 aaKnown RBP15.04■□□□□ -0
SS18-208ENST00000577751 SAMD5Q5TGI4 173 aa15.04■□□□□ -0
SS18-208ENST00000577751 ASPHD1Q5U4P2 390 aa15.04■□□□□ -0
SS18-208ENST00000577751 LPCAT3Q6P1A2 487 aa15.04■□□□□ -0
SS18-208ENST00000577751 LHFPL1Q86WI0 220 aa15.04■□□□□ -0
SS18-208ENST00000577751 MMD2Q8IY49 270 aa15.04■□□□□ -0
SS18-208ENST00000577751 CMTM1Q8IZ96 169 aa15.04■□□□□ -0
SS18-208ENST00000577751 VKORC1L1Q8N0U8 176 aa15.04■□□□□ -0
SS18-208ENST00000577751 ARRDC1Q8N5I2 433 aa15.04■□□□□ -0
SS18-208ENST00000577751 LINC00482Q8N8I6 264 aa15.04■□□□□ -0
SS18-208ENST00000577751 OR51H1Q8NH63 302 aa15.04■□□□□ -0
SS18-208ENST00000577751 VSTM2AQ8TAG5 236 aa15.04■□□□□ -0
SS18-208ENST00000577751 TMEM167AQ8TBQ9 72 aa15.04■□□□□ -0
SS18-208ENST00000577751 CD300LFQ8TDQ1 290 aa15.04■□□□□ -0
SS18-208ENST00000577751 C4orf3Q8WVX3 66 aa15.04■□□□□ -0
SS18-208ENST00000577751 RHOVQ96L33 236 aa15.04■□□□□ -0
SS18-208ENST00000577751 OR2A7Q96R45 310 aa15.04■□□□□ -0
SS18-208ENST00000577751 RSRP1Q9BUV0 290 aa15.04■□□□□ -0
SS18-208ENST00000577751 G3V4G9 280 aa15.03■□□□□ -0
SS18-208ENST00000577751 CREBL2O60519 120 aaPredicted RBP15.03■□□□□ -0
SS18-208ENST00000577751 HPRT1P00492 218 aa15.03■□□□□ -0
SS18-208ENST00000577751 TAS2R19P59542 299 aa15.03■□□□□ -0
SS18-208ENST00000577751 TNXAQ16473 311 aa15.03■□□□□ -0
SS18-208ENST00000577751 POU2AF1Q16633 256 aa15.03■□□□□ -0
SS18-208ENST00000577751 MRPL41Q8IXM3 137 aaKnown RBP15.03■□□□□ -0
SS18-208ENST00000577751 RAX2Q96IS3 184 aa15.03■□□□□ -0
SS18-208ENST00000577751 AIFM2Q9BRQ8 373 aa15.03■□□□□ -0
SS18-208ENST00000577751 MSGN1A6NI15 193 aa15.02■□□□□ -0
SS18-208ENST00000577751 I3L521 148 aa15.02■□□□□ -0
SS18-208ENST00000577751 CCL24O00175 119 aa15.02■□□□□ -0
SS18-208ENST00000577751 KBTBD11O94819 623 aa15.02■□□□□ -0
SS18-208ENST00000577751 RLN1P04808 185 aa15.02■□□□□ -0
SS18-208ENST00000577751 IFNA6P05013 189 aa15.02■□□□□ -0
SS18-208ENST00000577751 CD33P20138 364 aa15.02■□□□□ -0
SS18-208ENST00000577751 TAS2R31P59538 309 aa15.02■□□□□ -0
SS18-208ENST00000577751 RUNX1Q01196 453 aa15.02■□□□□ -0
SS18-208ENST00000577751 OR4D10Q8NGI6 311 aa15.02■□□□□ -0
SS18-208ENST00000577751 CASTOR1Q8WTX7 329 aa15.02■□□□□ -0
SS18-208ENST00000577751 SRSF12Q8WXF0 261 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms