RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TMED4Q7Z7H5 227 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SPAG16Q8N0X2 631 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR2T10Q8NGZ9 312 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR4S2Q8NH73 311 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 OR5R1Q8NH85 324 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 MITD1Q8WV92 249 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 TCTEX1D2Q8WW35 142 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 CAPSLQ8WWF8 208 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 FLYWCH2Q96CP2 140 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 EAF1Q96JC9 268 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 GPHA2Q96T91 129 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 SLC35D1Q9NTN3 355 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
CDK5RAP3-204ENST00000577664 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C7orf66A4D0T2 115 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 A6NDX4 124 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 DBX1A6NMT0 343 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RAMP3O60896 148 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 NDUFA3O95167 84 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGKV1-39P01597 117 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGKV1D-39P04432 117 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR5AC1P0C628 307 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HLA-GP17693 338 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SRPXP78539 464 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TRIM16LQ309B1 348 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C16orf82Q7Z2V1 217 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR51H1Q8NH63 302 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ZNF431Q8TF32 576 aaPredicted RBP8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SSMEM1Q8WWF3 244 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 PITPNC1Q9UKF7 332 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TCF19Q9Y242 345 aa8.89□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SRRM4A7MD48 611 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 FCGR3BO75015 233 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SPDEFO95238 335 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HRASP01112 189 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGLV2-23P01705 113 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SERPINE2P07093 398 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CRYGBP07316 175 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SNRNP70P08621 437 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 P0C879 139 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 NQO2P16083 231 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LPAR6P43657 344 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 Q6ZNX1 250 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SELENOHQ8IZQ5 122 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TEX45Q8NA69 505 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LSM10Q969L4 123 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SEC22AQ96IW7 307 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RITA1Q96K30 269 aa8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RBM14Q96PK6 669 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGHV3-72A0A0B4J1Y9 119 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 A0A0B4J293 547 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 FGF16O43320 207 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ATG12O94817 140 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR2F2O95006 317 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CRYZL1O95825 349 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGKV1D-33P01593 117 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 IGKV1-33P01594 117 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HLA-AP01891 365 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SLC25A6P12236 298 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 VDAC1P21796 283 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 PAX6P26367 422 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 UBE2KP61086 200 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RPL15P61313 204 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CBX3Q13185 183 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TATDN3Q17R31 274 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ANKRD55Q3KP44 614 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SP6Q3SY56 376 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 AARDQ4LEZ3 155 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C4orf46Q504U0 113 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 FAM219AQ8IW50 185 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 PUSL1Q8N0Z8 303 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LGI3Q8N145 548 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 OR4A5Q8NH83 315 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 LHFPL5Q8TAF8 219 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RBPMSQ93062 196 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 GPN1Q9HCN4 374 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 BET1LQ9NYM9 111 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C1RLQ9NZP8 487 aa8.87□□□□□ -0.99
CDK5RAP3-204ENST00000577664 MDFIC2A0A1B0GVS7 189 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 H3BUX3 64 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 H7C2Y5 167 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 M0QZK8 103 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 CREBL2O60519 120 aaPredicted RBP8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 F2RL1P55085 397 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 HILS1P60008 231 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RPS16P62249 146 aaKnown RBP8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 PSG5Q15238 335 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 MRGPRG-AS1Q2M3A8 158 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 FAM71E2Q8N5Q1 922 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 SIGLECL1Q8N7X8 197 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 COQ8AQ8NI60 647 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 VSTM2AQ8TAG5 236 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 TMEM167AQ8TBQ9 72 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 C22orf15Q8WYQ4 148 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
CDK5RAP3-204ENST00000577664 RHOVQ96L33 236 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 508.5 ms