RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RRHO14718 337 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 JTBO76095 146 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 RGS11O94810 467 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 DIRAS3O95661 229 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 NAPSAO96009 420 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 CLEC3BP05452 202 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 CDK1P06493 297 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 SCTP09683 121 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 ARL3P36405 182 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 DEFA5Q01523 94 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 PLA2G7Q13093 441 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 PLGLAQ15195 96 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 LY6G6FQ5SQ64 297 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 OGFRL1Q5TC84 451 aaPredicted RBP4.78□□□□□ -1.64
NUP88-212ENST00000576708 UNQ5815/PRO19632Q6UWF5 114 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 PPP1R27Q86WC6 154 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 PACRGLQ8N7B6 248 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 TMEM203Q969S6 136 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 TM2D1Q9BX74 207 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 TMEM59Q9BXS4 323 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 TOLLIPQ9H0E2 274 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 CST11Q9H112 138 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 LPAR5Q9H1C0 372 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 ABRACLQ9P1F3 81 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 GHRLQ9UBU3 117 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 FOXA2Q9Y261 457 aaPredicted RBP4.78□□□□□ -1.64
NUP88-212ENST00000576708 ERGIC3Q9Y282 383 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 LSM2Q9Y333 95 aaKnown RBP4.78□□□□□ -1.64
NUP88-212ENST00000576708 CBY1Q9Y3M2 126 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 NUBP2Q9Y5Y2 271 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 SMAD5-AS1Q9Y6J3 95 aa4.78□□□□□ -1.64
NUP88-212ENST00000576708 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 TRAV34A0A0B4J273 112 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 IGKV1-6A0A0C4DH72 117 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 MFSD2BA6NFX1 497 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 LINC01619G3V211 115 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 H7C2Y5 167 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 RAB29O14966 203 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ARPC1BO15143 372 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 SLC22A1O15245 554 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 CA2P00918 260 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 IGKV1-16P04430 117 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 CD3GP09693 182 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 UBBP0CG47 229 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 CD37P11049 281 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 SRMP19623 302 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 CEACAM6P40199 344 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 CBX5P45973 191 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 PCP4P48539 62 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ELLP55199 621 aaPredicted RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 TMEM50BP56557 158 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 CLDN12P56749 244 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 TPPP2P59282 170 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 RPS25P62851 125 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 HLA-DRB3P79483 266 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 PSG5Q15238 335 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 MED22Q15528 200 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
NUP88-212ENST00000576708 HSD17B12Q53GQ0 312 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 LIPKQ5VXJ0 399 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 GLT8D1Q68CQ7 371 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ZNF660Q6AZW8 331 aaPredicted RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 TMEM91Q6ZNR0 172 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ZNF554Q86TJ5 538 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ZNF429Q86V71 674 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 MS4A15Q8N5U1 240 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 ZNF383Q8NA42 475 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 LFNGQ8NES3 379 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 OR5T1Q8NG75 326 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 KCNG3Q8TAE7 436 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 PHYHIPQ92561 330 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 ARHGAP5-AS1Q96IT6 56 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 RCHY1Q96PM5 261 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 AGMATQ9BSE5 352 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 Q9N2K0 584 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 PLEKHJ1Q9NW61 149 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 PIPOXQ9P0Z9 390 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 METTL1Q9UBP6 276 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 WASHC3Q9Y3C0 194 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 AK6Q9Y3D8 172 aaKnown RBP4.77□□□□□ -1.65
NUP88-212ENST00000576708 LRRC42Q9Y546 428 aa4.77□□□□□ -1.65
NUP88-212ENST00000576708 TRBV6-6A0A0A6YYG2 114 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 LOC100506127A0A0U1RQW1 187 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 OR5H14A6NHG9 310 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 FOXI3A8MTJ6 420 aaPredicted RBP4.76□□□□□ -1.65
NUP88-212ENST00000576708 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 M0R1X1 148 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 HSPA12AO43301 675 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 TRGV3P03979 118 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 HSPB1P04792 205 aaKnown RBP4.76□□□□□ -1.65
NUP88-212ENST00000576708 UCHL1P09936 223 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 STAG3L3P0CL85 134 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 HSMCR30P0CW71 290 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 GP9P14770 177 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 MC5RP33032 325 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 VEGFCP49767 419 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms