RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 DUS4LO95620 317 aaKnown RBP18.32■□□□□ 0.52
SNF8-217ENST00000576353 HRH1P35367 487 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 PRSS8Q16651 343 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 BEAN1Q3B7T3 259 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 KPRPQ5T749 579 aaPredicted RBP18.32■□□□□ 0.52
SNF8-217ENST00000576353 TMEM17Q86X19 198 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 ZNF491Q8N8L2 437 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 RAX2Q96IS3 184 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 TMEM68Q96MH6 324 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 P2RX4Q99571 388 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 VSIG4Q9Y279 399 aa18.32■□□□□ 0.52
SNF8-217ENST00000576353 NOTCH3Q9UM47 2321 aa18.31■□□□□ 0.52
SNF8-217ENST00000576353 TNFSF12O43508 249 aa18.31■□□□□ 0.52
SNF8-217ENST00000576353 SOX15O60248 233 aa18.31■□□□□ 0.52
SNF8-217ENST00000576353 CATR1Q13166 79 aa18.31■□□□□ 0.52
SNF8-217ENST00000576353 KIAA0141Q14154 515 aaPredicted RBP18.31■□□□□ 0.52
SNF8-217ENST00000576353 MOB3AQ96BX8 217 aa18.31■□□□□ 0.52
SNF8-217ENST00000576353 CCDC59Q9P031 241 aaKnown RBP18.31■□□□□ 0.52
SNF8-217ENST00000576353 PLXNB1O43157 2135 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 SAA1P0DJI8 122 aaPredicted RBP18.3■□□□□ 0.52
SNF8-217ENST00000576353 IGLL1P15814 213 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 SSBP2P81877 361 aaPredicted RBP18.3■□□□□ 0.52
SNF8-217ENST00000576353 IDO2Q6ZQW0 420 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 ZNF818PQ6ZRF7 136 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 VSTM2AQ8TAG5 236 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 DYNC2LI1Q8TCX1 351 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 GPHA2Q96T91 129 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 AIFM2Q9BRQ8 373 aa18.3■□□□□ 0.52
SNF8-217ENST00000576353 ACTL6BO94805 426 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 HRASP01112 189 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 GNRHRP30968 328 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 BRWD1-AS2P59051 145 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 TSPAN5P62079 268 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 MRGPRG-AS1Q2M3A8 158 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 ISOC1Q96CN7 298 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 DUX3Q96PT4 197 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 SLA2Q9H6Q3 261 aa18.29■□□□□ 0.52
SNF8-217ENST00000576353 H3BMQ9 156 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 CTDSP2O14595 271 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 RBFOX2O43251 390 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNF8-217ENST00000576353 RUNX1Q01196 453 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 TNXAQ16473 311 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 DEFB136Q30KP8 78 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 MMD2Q8IY49 270 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 SPAG16Q8N0X2 631 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 CD300LFQ8TDQ1 290 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 MCRIP2Q9BUT9 160 aaKnown RBP18.28■□□□□ 0.52
SNF8-217ENST00000576353 GPR61Q9BZJ8 451 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 MIXL1Q9H2W2 232 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 GNB4Q9HAV0 340 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 CMYA5Q8N3K9 4069 aa18.28■□□□□ 0.52
SNF8-217ENST00000576353 H3BUA1 57 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 OR2A4O95047 310 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 AADACL3Q5VUY0 350 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 LPCAT3Q6P1A2 487 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 LAX1Q8IWV1 398 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 CMTM1Q8IZ96 169 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 VKORC1L1Q8N0U8 176 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 POC5Q8NA72 575 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 FCAMRQ8WWV6 532 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 RHOVQ96L33 236 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 OR2A7Q96R45 310 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 ABHD1Q96SE0 405 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 PHB2Q99623 299 aa18.27■□□□□ 0.52
SNF8-217ENST00000576353 ZNF430Q9H8G1 570 aaPredicted RBP18.27■□□□□ 0.52
SNF8-217ENST00000576353 MSGN1A6NI15 193 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 I3L521 148 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 WIPF1O43516 503 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 RAB25P57735 213 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 PDLIM3Q53GG5 364 aaPredicted RBP18.26■□□□□ 0.51
SNF8-217ENST00000576353 VAX1Q5SQQ9 334 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 OR5T1Q8NG75 326 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 OR11H1Q8NG94 326 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 OR52I2Q8NH67 350 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 CASTOR1Q8WTX7 329 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 MS4A10Q96PG2 267 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 OR5B12Q96R08 314 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 ZNF355PQ9NSJ1 428 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 KLK11Q9UBX7 282 aa18.26■□□□□ 0.51
SNF8-217ENST00000576353 RAMP3O60896 148 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 TPPP2P59282 170 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 MRPS10P82664 201 aaKnown RBP18.25■□□□□ 0.51
SNF8-217ENST00000576353 RNASE12Q5GAN4 147 aaKnown RBP18.25■□□□□ 0.51
SNF8-217ENST00000576353 PUSL1Q8N0Z8 303 aaKnown RBP18.25■□□□□ 0.51
SNF8-217ENST00000576353 OR1N2Q8NGR9 330 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 OR51H1Q8NH63 302 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 SRSF12Q8WXF0 261 aaKnown RBP18.25■□□□□ 0.51
SNF8-217ENST00000576353 SPIN2AQ99865 258 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 SPIN2BQ9BPZ2 258 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 RABL2AQ9UBK7 228 aaPredicted RBP18.25■□□□□ 0.51
SNF8-217ENST00000576353 MTFP1Q9UDX5 166 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 RABL2BQ9UNT1 228 aa18.25■□□□□ 0.51
SNF8-217ENST00000576353 GPR31O00270 319 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 PGLYRP1O75594 196 aaPredicted RBP18.24■□□□□ 0.51
SNF8-217ENST00000576353 KBTBD11O94819 623 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 HPRT1P00492 218 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 TRGV3P03979 118 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 IFNA6P05013 189 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 TBPP20226 339 aa18.24■□□□□ 0.51
SNF8-217ENST00000576353 S100GP29377 79 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms