RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 FGF20Q9NP95 211 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 MRPL27Q9P0M9 148 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-211ENST00000575783 TRBV6-6A0A0A6YYG2 114 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 IGHV3-35A0A0C4DH35 117 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 PNMA8CA0A1B0GUJ8 204 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 RTL8CO15255 209 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 C8orf88P0DMB2 117 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 RRASP10301 218 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 CEACAM19Q7Z692 300 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 EEF1AKMT3Q96AZ1 226 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 KCNK15Q9H427 330 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 C5orf66Q9H5L9 145 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 Q9N2K0 584 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 ZNF257Q9Y2Q1 563 aa11.95□□□□□ -0.5
CTDNEP1-211ENST00000575783 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 M0R2N4 97 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 CLEC3BP05452 202 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 CD3GP09693 182 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 UBBP0CG47 229 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 ZNF575Q86XF7 245 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 GGHQ92820 318 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 PGLYRP3Q96LB9 341 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 DERL3Q96Q80 235 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 C11orf68Q9H3H3 251 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 CLEC2DQ9UHP7 191 aa11.94□□□□□ -0.5
CTDNEP1-211ENST00000575783 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 TSPAN4O14817 238 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 BET1O15155 118 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 DCKP27707 260 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 TPBGQ13641 420 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 C1orf146Q5VVC0 180 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 MMD2Q8IY49 270 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 OR4A5Q8NH83 315 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 CD300LFQ8TDQ1 290 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 C6orf62Q9GZU0 229 aaPredicted RBP11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
CTDNEP1-211ENST00000575783 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 SOCS1O15524 211 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 CREBL2O60519 120 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 GSTT2P0CG29 244 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 GSTT2BP0CG30 244 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 UNC119Q13432 240 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 CDK10Q15131 360 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 LAMTOR1Q6IAA8 161 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 SETD9Q8NE22 299 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 APH1BQ8WW43 257 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 DCUN1D5Q9BTE7 237 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 C12orf4Q9NQ89 552 aa11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-211ENST00000575783 OR4C46A6NHA9 309 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 NPIPB5A8MRT5 1133 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 MYOD1P15172 320 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 RPA2P15927 270 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 MYL12AP19105 171 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 SRMP19623 302 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 GALP22466 123 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 ZNF124Q15973 351 aa11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CTDNEP1-211ENST00000575783 LINC00473A8K010 186 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 GPR183P32249 361 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 SERPINB10P48595 397 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 CBR4Q8N4T8 237 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 OR6M1Q8NGM8 313 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 CMSS1Q9BQ75 279 aaKnown RBP11.9□□□□□ -0.5
CTDNEP1-211ENST00000575783 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 MFSD2BA6NFX1 497 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 E7EUB6 86 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 DHFRP00374 187 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 DEFA4P12838 97 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 AREGP15514 252 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 DUTP33316 252 aaKnown RBP11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 PLET1Q6UQ28 207 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 NR2C2APQ86WQ0 139 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 ZNF645Q8N7E2 425 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
CTDNEP1-211ENST00000575783 LOC100130705A0A1B0GUX0 176 aa11.88□□□□□ -0.51
CTDNEP1-211ENST00000575783 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms