RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 NKX2-1P43699 371 aaPredicted RBP11.15□□□□□ -0.63
ERCC4-207ENST00000575156 AP2S1P53680 142 aaPredicted RBP11.15□□□□□ -0.63
ERCC4-207ENST00000575156 PRSS54Q6PEW0 395 aa11.15□□□□□ -0.63
ERCC4-207ENST00000575156 MOB3BQ86TA1 216 aa11.15□□□□□ -0.63
ERCC4-207ENST00000575156 WFDC11Q8NEX6 87 aa11.15□□□□□ -0.63
ERCC4-207ENST00000575156 DCUN1D4Q92564 292 aa11.15□□□□□ -0.63
ERCC4-207ENST00000575156 MSGN1A6NI15 193 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 DEDDO75618 318 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
ERCC4-207ENST00000575156 SLC25A6P12236 298 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 OR2B8PP59922 312 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
ERCC4-207ENST00000575156 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 RHOVQ96L33 236 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 TMEM140Q9NV12 185 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 POMT1Q9Y6A1 747 aa11.14□□□□□ -0.63
ERCC4-207ENST00000575156 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 RNF222A6NCQ9 220 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 HMSDA8MTL9 139 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 LEUTXA8MZ59 168 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 TIMM23O14925 209 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 ST8SIA3O43173 380 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 LYL1P12980 280 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 UBE2E1P51965 193 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 ID3Q02535 119 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 SSX2Q16385 188 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 OR4A47Q6IF82 309 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 WASHC3Q9Y3C0 194 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 PIGBOS1A0A0B4J2F0 54 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 SHOXO15266 292 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 SSSCA1O60232 199 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 ATG12O94817 140 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 TMEM50AO95807 157 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 AVPP01185 164 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 CD24P25063 80 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 ERVK-16P61578 105 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 TMEM65Q6PI78 240 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
ERCC4-207ENST00000575156 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
ERCC4-207ENST00000575156 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 MYOD1P15172 320 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 SAA4P35542 130 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 SPINK9Q5DT21 86 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 DHRS7BQ6IAN0 325 aaPredicted RBP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 AUP1Q9Y679 476 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 CHST1O43916 411 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 SAA1P0DJI8 122 aaPredicted RBP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 RRASP10301 218 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 CNTFRP26992 372 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 LGALS4P56470 323 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 RELBQ01201 579 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
ERCC4-207ENST00000575156 COA4Q9NYJ1 87 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 CR1P17927 2039 aa11.12□□□□□ -0.63
ERCC4-207ENST00000575156 TRAV40A0A0B4J280 105 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 L7N2F9 121 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 TSC22D2O75157 780 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
ERCC4-207ENST00000575156 HRASP01112 189 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 RLN2P04090 185 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 PET100P0DJ07 73 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 IGHV4-38-2P0DP08 117 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 MC5RP33032 325 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 CEACAM3P40198 252 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 TMEM249Q2WGJ8 235 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 CLEC9AQ6UXN8 241 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 OR4C13Q8NGP0 309 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
ERCC4-207ENST00000575156 CFHR4Q92496 578 aa11.11□□□□□ -0.63
ERCC4-207ENST00000575156 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
ERCC4-207ENST00000575156 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.11□□□□□ -0.63
ERCC4-207ENST00000575156 SOX21Q9Y651 276 aaPredicted RBP11.11□□□□□ -0.63
ERCC4-207ENST00000575156 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 NPFFO15130 113 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 TXNL1O43396 289 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 TGFAP01135 160 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 IAPPP10997 89 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 RAB13P51153 203 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 PAX9P55771 341 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 TNFRSF9Q07011 255 aa11.1□□□□□ -0.63
ERCC4-207ENST00000575156 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms