RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 AKR1C2P52895 323 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 DHRS7BQ6IAN0 325 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 VKORC1L1Q8N0U8 176 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 RNASE11Q8TAA1 199 aaKnown RBP19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 R3HDM4Q96D70 268 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 PDCD10Q9BUL8 212 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 A0A0G2JRQ6 117 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 SPNS3Q6ZMD2 512 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 FLYWCH2Q96CP2 140 aaKnown RBP19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 SEC22AQ96IW7 307 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 SMR3AQ99954 134 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 YAE1D1Q9NRH1 226 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 COMMD9Q9P000 198 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 NUP50Q9UKX7 468 aa19.34■□□□□ 0.69
ATPAF1-213ENST00000574428 TRAV14DV4A0A0A6YYC5 116 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 C5orf51A6NDU8 294 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 MARCH11A6NNE9 402 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 CYSRT1A8MQ03 144 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 VENTXO95231 258 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 IFNA21P01568 189 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 VDAC1P21796 283 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 HABP2Q14520 560 aaPredicted RBP19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 IZUMO4Q1ZYL8 232 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 SSX9Q7RTT3 188 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 RITA1Q96K30 269 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 FAM96BQ9Y3D0 163 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 TMED3Q9Y3Q3 217 aa19.33■□□□□ 0.68
ATPAF1-213ENST00000574428 DUXBA0A1W2PPF3 345 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 SHOXO15266 292 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 IL17RELQ6ZVW7 336 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 OR4C13Q8NGP0 309 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 OR10C1Q96KK4 312 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 HARBI1Q96MB7 349 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 TSC22D2O75157 780 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 NQO2P16083 231 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 FBLN7Q53RD9 439 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 TMEM177Q53S58 311 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 NMSQ5H8A3 153 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 GSG1LQ6UXU4 331 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 C22orf15Q8WYQ4 148 aa19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 RRNAD1Q96FB5 475 aaKnown RBP19.32■□□□□ 0.68
ATPAF1-213ENST00000574428 TLN2Q9Y4G6 2542 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 FXYD6-FXYD2A0A087WZ82 144 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 PIGBOS1A0A0B4J2F0 54 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 SRRM4A7MD48 611 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 IGKV1D-33P01593 117 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 IGKV1-33P01594 117 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 CXCL2P19875 107 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 CD1BP29016 333 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 RPS16P62249 146 aaKnown RBP19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 BCL6BQ8N143 479 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 DMBX1Q8NFW5 382 aa19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 OSR1Q8TAX0 266 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 MS4A7Q9GZW8 240 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-213ENST00000574428 ATG12O94817 140 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 SNRNP70P08621 437 aaKnown RBP19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 ARHGDIBP52566 201 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 ERVK-16P61578 105 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 FAM120AOSQ5T036 256 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 LSM10Q969L4 123 aaKnown RBP19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 GPR146Q96CH1 333 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 RHOVQ96L33 236 aa19.3■□□□□ 0.68
ATPAF1-213ENST00000574428 HMSDA8MTL9 139 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 HRASP01112 189 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 P0C879 139 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 BPIFB3P59826 476 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 HES1Q14469 280 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 IAH1Q2TAA2 248 aaPredicted RBP19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 MMP24Q9Y5R2 645 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 MDFIC2A0A1B0GVS7 189 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 FBP1P09467 338 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 FGL1Q08830 312 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 HNF4GQ14541 408 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 Q6ZRM9 215 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 H2BFWTQ7Z2G1 175 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 TMEM140Q9NV12 185 aa19.29■□□□□ 0.68
ATPAF1-213ENST00000574428 ARPC5O15511 151 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 ATP6V1G1O75348 118 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 CNTFRP26992 372 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 BRS3P32247 399 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 OR4A47Q6IF82 309 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 FAM219AQ8IW50 185 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 PPP1R1CQ8WVI7 109 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 TMUB1Q9BVT8 246 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 GSKIPQ9P0R6 139 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 CACNG5Q9UF02 275 aa19.28■□□□□ 0.68
ATPAF1-213ENST00000574428 L7N2F9 121 aa19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 MOSP00540 346 aa19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 SAA1P0DJI8 122 aaPredicted RBP19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 LRRC37A5PQ49AS3 106 aa19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 EAF1Q96JC9 268 aaPredicted RBP19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 C2orf50Q96LR7 162 aa19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 MEGF9Q9H1U4 602 aa19.27■□□□□ 0.68
ATPAF1-213ENST00000574428 FAM90A9PA6NNJ1 464 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 LY6G6DO95868 133 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 IGLV2-23P01705 113 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 CD99P14209 185 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 POU2AF1Q16633 256 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 DEFB112Q30KQ8 113 aa19.27■□□□□ 0.67
ATPAF1-213ENST00000574428 NMES1Q9C002 83 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms