RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 C9JCJ5 164 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 H7C2G1 150 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 MT-CO2P00403 227 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 RPSAP08865 295 aaKnown RBP0.73□□□□□ -2.29
CDC27-216ENST00000574304 TFPTP0C1Z6 253 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 MIPP30301 263 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 RPL28P46779 137 aaKnown RBP0.73□□□□□ -2.29
CDC27-216ENST00000574304 CLDN12P56749 244 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 TAS2R20P59543 309 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 SNAP25P60880 206 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 FABP5Q01469 135 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 PMS2P3Q13401 168 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 JOSD1Q15040 202 aaPredicted RBP0.73□□□□□ -2.29
CDC27-216ENST00000574304 FAM173BQ6P4H8 233 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 RPS19BP1Q86WX3 136 aaKnown RBP0.73□□□□□ -2.29
CDC27-216ENST00000574304 GPHB5Q86YW7 130 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 C19orf60Q96EN9 201 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 ZNHIT6Q9NWK9 470 aaKnown RBP0.73□□□□□ -2.29
CDC27-216ENST00000574304 NAT8Q9UHE5 227 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 POLEQ07864 2286 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 GREB1Q4ZG55 1949 aa0.73□□□□□ -2.29
CDC27-216ENST00000574304 THSD7AQ9UPZ6 1657 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 TRAV7A0A075B6U4 112 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 A0A0J9YW62 118 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 F8VZ95 297 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 MKRN2OSH3BPM6 223 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 K7ERQ8 282 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 CCRL2O00421 344 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 PPBPP02775 128 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 LGALS1P09382 135 aaKnown RBP0.72□□□□□ -2.29
CDC27-216ENST00000574304 PSMB8P28062 276 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 RAB14P61106 215 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 AP1S1P61966 158 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 Q1T7F1 81 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 LRRC75BQ2VPJ9 315 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 ARHGAP11BQ3KRB8 267 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 LFNGQ8NES3 379 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 MBD3L1Q8WWY6 194 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 TIPINQ9BVW5 301 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 CFAP45Q9UL16 551 aa0.72□□□□□ -2.29
CDC27-216ENST00000574304 DICER1Q9UPY3 1922 aaKnown RBP0.72□□□□□ -2.29
CDC27-216ENST00000574304 LRPPRCP42704 1394 aaKnown RBP0.71□□□□□ -2.3
CDC27-216ENST00000574304 STX10O60499 249 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 TRGC1P0CF51 173 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 EMP1P54849 157 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 HADHBP55084 474 aaKnown RBP0.71□□□□□ -2.3
CDC27-216ENST00000574304 HLA-DRB3P79483 266 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 ELOBQ15370 118 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 OR5L1Q8NGL2 311 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 SLC37A2Q8TED4 501 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 ODF3Q96PU9 254 aa0.71□□□□□ -2.3
CDC27-216ENST00000574304 TECTAO75443 2155 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 C5orf49A4QMS7 147 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 YKT6O15498 198 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 NDUFS6O75380 124 aaKnown RBP0.7□□□□□ -2.3
CDC27-216ENST00000574304 ORM1P02763 201 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 PET100P0DJ07 73 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 ALDH3A1P30838 453 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 RPL30P62888 115 aaKnown RBP0.7□□□□□ -2.3
CDC27-216ENST00000574304 C9orf64Q5T6V5 341 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 SYCE1Q8N0S2 351 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 Q8N2B8 174 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 ACOT12Q8WYK0 555 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 CD300AQ9UGN4 299 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 HEATR5AQ86XA9 2040 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 REREQ9P2R6 1566 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 A0A1W2PP64 1363 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 ABCC12Q96J65 1359 aa0.7□□□□□ -2.3
CDC27-216ENST00000574304 FTCDNL1E5RQL4 147 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 COX7A2LO14548 114 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 TOX3O15405 576 aaPredicted RBP0.69□□□□□ -2.3
CDC27-216ENST00000574304 ATP8B1O43520 1251 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 IL6P05231 212 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 AKR1C1Q04828 323 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 DEFB115Q30KQ5 88 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 TMEM86AQ8N2M4 240 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 OR5B17Q8NGF7 314 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 TESCQ96BS2 214 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 ANKRD36BP1Q96IX9 119 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 MS4A6AQ9H2W1 248 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 TP53TG1Q9Y2A0 90 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 NCOA6Q14686 2063 aaPredicted RBP0.69□□□□□ -2.3
CDC27-216ENST00000574304 FLT4P35916 1363 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 BRWD1Q9NSI6 2320 aa0.69□□□□□ -2.3
CDC27-216ENST00000574304 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 TEX50A0A1B0GTY4 177 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 TRAPPC13A5PLN9 417 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 MEIS3P1A6NDR6 274 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 TRPC5OSA6NMA1 111 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 NEMFO60524 1076 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 UBBP0CG47 229 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 HIST1H4AP62805 103 aaKnown RBP0.68□□□□□ -2.3
CDC27-216ENST00000574304 FKBP1AP62942 108 aaKnown RBP0.68□□□□□ -2.3
CDC27-216ENST00000574304 NUP160Q12769 1436 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 LRRC26Q2I0M4 334 aa0.68□□□□□ -2.3
CDC27-216ENST00000574304 GNPNAT1Q96EK6 184 aaPredicted RBP0.68□□□□□ -2.3
CDC27-216ENST00000574304 DERL2Q9GZP9 239 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms