RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CNN1P51911 297 aaKnown RBP15.85■□□□□ 0.13
SCARF1-206ENST00000573852 TAS2R60P59551 318 aa15.85■□□□□ 0.13
SCARF1-206ENST00000573852 TMEM144Q7Z5S9 345 aa15.85■□□□□ 0.13
SCARF1-206ENST00000573852 GPR179Q6PRD1 2367 aa15.85■□□□□ 0.13
SCARF1-206ENST00000573852 A0A0U1RQK1 487 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 ZNF320A2RRD8 509 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 MRPL41Q8IXM3 137 aaKnown RBP15.84■□□□□ 0.13
SCARF1-206ENST00000573852 MSL2Q9HCI7 577 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 KCNIP2Q9NS61 270 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 A0A1W2PPV4 95 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 C15orf65H3BRN8 121 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 FCGR3BO75015 233 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 TMEM249Q2WGJ8 235 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 INO80CQ6PI98 192 aaPredicted RBP15.84■□□□□ 0.13
SCARF1-206ENST00000573852 GBGT1Q8N5D6 347 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 RAB1CQ92928 201 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 C2orf88Q9BSF0 95 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 NDUFAF3Q9BU61 184 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 ARRDC1-AS1Q9H2J1 176 aa15.84■□□□□ 0.13
SCARF1-206ENST00000573852 DSPP15924 2871 aaKnown RBP15.84■□□□□ 0.13
SCARF1-206ENST00000573852 TRBV20OR9-2A0A075B6H5 130 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 A0A1B0GUS0 222 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 RBFOX2O43251 390 aaKnown RBP eCLIP15.83■□□□□ 0.13
SCARF1-206ENST00000573852 OR4A8P0C604 315 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 CD99P14209 185 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 DUTP33316 252 aaKnown RBP15.83■□□□□ 0.13
SCARF1-206ENST00000573852 TMPRSS7Q7RTY8 843 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 WDR31Q8NA23 367 aa15.83■□□□□ 0.13
SCARF1-206ENST00000573852 ZNF891A8MT65 544 aaPredicted RBP15.83■□□□□ 0.12
SCARF1-206ENST00000573852 RRHO14718 337 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 TREML4Q6UXN2 200 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 VKORC1L1Q8N0U8 176 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 CD177Q8N6Q3 437 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 Q8TCH9 128 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 SDSLQ96GA7 329 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 TMEM204Q9BSN7 226 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 TRAPPC1Q9Y5R8 145 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 TECTAO75443 2155 aa15.83■□□□□ 0.12
SCARF1-206ENST00000573852 TNFSF15O95150 251 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 ZNF883P0CG24 379 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 EDDM3AQ14507 147 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 ZDHHC11Q9H8X9 412 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 SPINT2O43291 252 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 ARL14EPLP0DKL9 152 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 GPR12P47775 334 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 FABP6P51161 128 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 AARDQ4LEZ3 155 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 FAM234AQ9H0X4 552 aa15.82■□□□□ 0.12
SCARF1-206ENST00000573852 TET2Q6N021 2002 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-206ENST00000573852 TIMM8AO60220 97 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-206ENST00000573852 CCKARP32238 428 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 FOXL1Q12952 345 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 TRIP6Q15654 476 aaKnown RBP15.81■□□□□ 0.12
SCARF1-206ENST00000573852 PRAMEF5Q5TYX0 476 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 TMEM256Q8N2U0 113 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 FER1L6-AS2Q96M78 137 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 MGST2Q99735 147 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 PXMP4Q9Y6I8 212 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 F6UZH7 168 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 HTD2P86397 168 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 PAX5Q02548 391 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 SMIM21Q3B7S5 101 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 MIC13Q5XKP0 118 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 Q6ZT83 130 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 SGMS2Q8NHU3 365 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 SFRP2Q96HF1 295 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 MS4A5Q9H3V2 200 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 HEYLQ9NQ87 328 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-206ENST00000573852 TRAV3A0A0B4J244 114 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 NUPR1O60356 82 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 ADH4P08319 380 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 OPRK1P41145 380 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 SPCS3P61009 180 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 BEND2Q8NDZ0 799 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 ELOVL5Q9NYP7 299 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 CLCF1Q9UBD9 225 aa15.81■□□□□ 0.12
SCARF1-206ENST00000573852 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 PRSS46E5RG02 174 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 HPRT1P00492 218 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 IGKV3-15P01624 115 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 COL8A2P25067 703 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 VDAC2P45880 294 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-206ENST00000573852 USF2Q15853 346 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-206ENST00000573852 FAM214BQ7L5A3 538 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 TCF23Q7RTU1 214 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 OR4A16Q8NH70 328 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 IMMP2LQ96T52 175 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 NCOR1O75376 2440 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 IGHV3-13P01766 116 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 IGHV3-7P01780 117 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 HNF1AP20823 631 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 GCH1P30793 250 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 LBHQ53QV2 105 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-206ENST00000573852 ABHD12Q8N2K0 398 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 GGTLC1Q9BX51 225 aa15.8■□□□□ 0.12
SCARF1-206ENST00000573852 SCO2A0A1W2PP80 73 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 AQP7O14520 342 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 MPDU1O75352 247 aa15.79■□□□□ 0.12
SCARF1-206ENST00000573852 STAG3L2P0CL84 134 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms