RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 SAA1P0DJI8 122 aaPredicted RBP15.62■□□□□ 0.09
NUP88-204ENST00000572290 ALDH3B2P48448 385 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 TPPP2P59282 170 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 FXYD4P59646 89 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 KRTAP10-11P60412 298 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 EGFEM1PQ0D2K5 195 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 TNXAQ16473 311 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 MZT2AQ6P582 158 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 GPR141Q7Z602 305 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 POC5Q8NA72 575 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 OR5T1Q8NG75 326 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 ZNF355PQ9NSJ1 428 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 EHFQ9NZC4 300 aa15.62■□□□□ 0.09
NUP88-204ENST00000572290 H3BUA1 57 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 TNFSF12O43508 249 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 CREBL2O60519 120 aaPredicted RBP15.61■□□□□ 0.09
NUP88-204ENST00000572290 HPGDSO60760 199 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 TRGV3P03979 118 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 LGALS1P09382 135 aaKnown RBP15.61■□□□□ 0.09
NUP88-204ENST00000572290 NAT1P18440 290 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 HERV-K104P61576 105 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 ASPHD1Q5U4P2 390 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 AP3S1Q92572 193 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 GPHA2Q96T91 129 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 PHB2Q99623 299 aa15.61■□□□□ 0.09
NUP88-204ENST00000572290 ALX4Q9H161 411 aaPredicted RBP15.61■□□□□ 0.09
NUP88-204ENST00000572290 MSGN1A6NI15 193 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 IGHV3-11P01762 117 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 PMP2P02689 132 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 ZNF182P17025 639 aaPredicted RBP15.6■□□□□ 0.09
NUP88-204ENST00000572290 ELK1P19419 428 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 KIR2DS2P43631 304 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 BRWD1-AS2P59051 145 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 TAS2R46P59540 309 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 DYRK1AQ13627 763 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 C9orf66Q5T8R8 295 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 TMEM17Q86X19 198 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 MMD2Q8IY49 270 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 OR5H2Q8NGV7 314 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 GPX8Q8TED1 209 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 RHOVQ96L33 236 aa15.6■□□□□ 0.09
NUP88-204ENST00000572290 ZNF430Q9H8G1 570 aaPredicted RBP15.6■□□□□ 0.09
NUP88-204ENST00000572290 ACTL6BO94805 426 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 RFX2P48378 723 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 DHRS11Q6UWP2 260 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 SNX29P2Q8IUI4 249 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 VSTM2AQ8TAG5 236 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 SRSF12Q8WXF0 261 aaKnown RBP15.59■□□□□ 0.09
NUP88-204ENST00000572290 ZNF2Q9BSG1 426 aaPredicted RBP15.59■□□□□ 0.09
NUP88-204ENST00000572290 SCPEP1Q9HB40 452 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 ZMAT5Q9UDW3 170 aaKnown RBP15.59■□□□□ 0.09
NUP88-204ENST00000572290 NOTCH3Q9UM47 2321 aa15.59■□□□□ 0.09
NUP88-204ENST00000572290 FAM25AB3EWG3 89 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 FAM25CB3EWG5 89 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 FAM25GB3EWG6 89 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 SEC14L6B5MCN3 397 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 LINC01619G3V211 115 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 OR2A4O95047 310 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 CATR1Q13166 79 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 ZNF818PQ6ZRF7 136 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 VKORC1L1Q8N0U8 176 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 SPAG16Q8N0X2 631 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 BORCS5Q969J3 196 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 OR2A7Q96R45 310 aa15.58■□□□□ 0.08
NUP88-204ENST00000572290 IGHV4OR15-8A0A075B7B6 117 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 A0A087WW49 117 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 A0A0G2JLM5 398 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 K7EIL1 84 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 MPPED1O15442 326 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 BRI3O95415 125 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 HRASP01112 189 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 APELAP0DMC3 54 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 HLA-DMAP28067 261 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 LYSMD2Q8IV50 215 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 PUSL1Q8N0Z8 303 aaKnown RBP15.57■□□□□ 0.08
NUP88-204ENST00000572290 DCUN1D4Q92564 292 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 MOB3AQ96BX8 217 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 COA4Q9NYJ1 87 aa15.57■□□□□ 0.08
NUP88-204ENST00000572290 C13orf42A0A1B0GVH6 325 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 WI2-2373I1.2A0A1W2PRP0 233 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 SULT1C2O00338 296 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 RBFOX2O43251 390 aaKnown RBP eCLIP15.56■□□□□ 0.08
NUP88-204ENST00000572290 RAMP3O60896 148 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 KBTBD11O94819 623 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 HSPB1P04792 205 aaKnown RBP15.56■□□□□ 0.08
NUP88-204ENST00000572290 GNRHRP30968 328 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 HRH1P35367 487 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 SLURP1P55000 103 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 DGCR2P98153 550 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 OR6F1Q8NGZ6 308 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 TMEM167AQ8TBQ9 72 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 SPIN2AQ99865 258 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 SPIN2BQ9BPZ2 258 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 TINAGL1Q9GZM7 467 aaPredicted RBP15.56■□□□□ 0.08
NUP88-204ENST00000572290 ADAM30Q9UKF2 790 aa15.56■□□□□ 0.08
NUP88-204ENST00000572290 OVOL1O14753 267 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 OR9G9P0C7N8 305 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 RCVRNP35243 200 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 C10orf55Q5SWW7 151 aa15.55■□□□□ 0.08
NUP88-204ENST00000572290 AADACL3Q5VUY0 350 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms