RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 LAX1Q8IWV1 398 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 PUSL1Q8N0Z8 303 aaKnown RBP6.73□□□□□ -1.33
SMG6-210ENST00000572205 ZNF491Q8N8L2 437 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 KLHL30-AS1Q8NEE0 82 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 CASTOR1Q8WTX7 329 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 MRGPRFQ96AM1 343 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 HARBI1Q96MB7 349 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 ABHD1Q96SE0 405 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 SLIRPQ9GZT3 109 aaKnown RBP6.73□□□□□ -1.33
SMG6-210ENST00000572205 CCL28Q9NRJ3 127 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 COMMD3Q9UBI1 195 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 WSB1Q9Y6I7 421 aa6.73□□□□□ -1.33
SMG6-210ENST00000572205 TEX22C9J3V5 150 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 E7EUB6 86 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 H7C2Y5 167 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 BRI3O95415 125 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 CRYZL1O95825 349 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 APOA2P02652 100 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 IGLL1P15814 213 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ZNF182P17025 639 aaPredicted RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 SLC6A1P30531 599 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 GNRHRP30968 328 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 FCGR2CP31995 323 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 KRTAP10-11P60412 298 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 UBE2KP61086 200 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 CDK10Q15131 360 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ECSCRQ19T08 205 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 PDLIM3Q53GG5 364 aaPredicted RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 C10orf55Q5SWW7 151 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 AADACL3Q5VUY0 350 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 DHRS11Q6UWP2 260 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 IDO2Q6ZQW0 420 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 KCTD9Q7L273 389 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 GPR141Q7Z602 305 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 PPP1R27Q86WC6 154 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ZNF695Q8IW36 515 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 GIMAP1Q8WWP7 306 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ACOT12Q8WYK0 555 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 MOB3AQ96BX8 217 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ISOC1Q96CN7 298 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 FLYWCH2Q96CP2 140 aaKnown RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 S100A16Q96FQ6 103 aaKnown RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 ADTRPQ96IZ2 230 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 TSNAXQ99598 290 aaKnown RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 SSBP4Q9BWG4 385 aaPredicted RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 NXF2Q9GZY0 626 aaKnown RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 DIABLOQ9NR28 239 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 CCDC59Q9P031 241 aaKnown RBP6.72□□□□□ -1.33
SMG6-210ENST00000572205 CEPT1Q9Y6K0 416 aa6.72□□□□□ -1.33
SMG6-210ENST00000572205 J3QRK9 145 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 CTDSP2O14595 271 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 PRB2P02812 416 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 VDAC1P21796 283 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 HRH1P35367 487 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 CBX5P45973 191 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 RFX2P48378 723 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 RORCP51449 518 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 TMBIM6P55061 237 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 SLC35B1P78383 322 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 DEFA5Q01523 94 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 ZNF45Q02386 682 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 POU2AF1Q16633 256 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 PRSS8Q16651 343 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 AKIRIN2Q53H80 203 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 OR2B11Q5JQS5 317 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 C19orf35Q6ZS72 473 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 LHFPL1Q86WI0 220 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 CLVS1Q8IUQ0 354 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 VKORC1L1Q8N0U8 176 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 OR2C3Q8N628 320 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 LFNGQ8NES3 379 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 RAB2BQ8WUD1 216 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 ARPC1AQ92747 370 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 UBE2E2Q96LR5 201 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 HSD17B10Q99714 261 aaKnown RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 SOSTQ9BQB4 213 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 ALX4Q9H161 411 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 ZNF430Q9H8G1 570 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 NECAP2Q9NVZ3 263 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 TAS2R8Q9NYW2 309 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 KIAA1456Q9P272 454 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
SMG6-210ENST00000572205 FOXA2Q9Y261 457 aaPredicted RBP6.71□□□□□ -1.34
SMG6-210ENST00000572205 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 A0A1W2PN81 502 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 RBFOX2O43251 390 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG6-210ENST00000572205 TNFSF12O43508 249 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 FCGR3BO75015 233 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 MYOD1P15172 320 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 PRSS3P35030 304 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 CHRNA7P36544 502 aa6.7□□□□□ -1.34
SMG6-210ENST00000572205 RPL5P46777 297 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms