RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HIST1H1DP16402 221 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 GADD45AP24522 165 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 PSMA1P25786 263 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 TRAM1Q15629 374 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 SSX1Q16384 188 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 GUCA2BQ16661 112 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 H1FOOQ8IZA3 346 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 TEX45Q8NA69 505 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 DYNLRB2Q8TF09 96 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 DDB2Q92466 427 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 NEURL2Q9BR09 285 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 ST6GALNAC5Q9BVH7 336 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 ATG5Q9H1Y0 275 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 PEMTQ9UBM1 199 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 STARD9Q9P2P6 4700 aa6.51□□□□□ -1.37
CTDNEP1-203ENST00000570385 RBMY1BA6NDE4 496 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 RBMY1EA6NEQ0 496 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 IFITM5A6NNB3 132 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF785A8K8V0 405 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 BRI3O95415 125 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 RBMY1DP0C7P1 496 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 NFYAP23511 347 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 PSMD7P51665 324 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 RPL30P62888 115 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 C15orf32Q32M92 178 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 CACNG8Q8WXS5 425 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 ADTRPQ96IZ2 230 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 SRD5A3Q9H8P0 318 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 ACOT13Q9NPJ3 140 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 SLC2A8Q9NY64 477 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
CTDNEP1-203ENST00000570385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 TRBV9A0A0B4J1U6 114 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 IGKV1D-13A0A0B4J2D9 117 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 C2orf70A6NJV1 201 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR11H12B2RN74 326 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 E7EUB6 86 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 PDCD5O14737 125 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 NDUFB8O95169 186 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 IGKV1-13P0DP09 117 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 FOLR2P14207 255 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 MYOD1P15172 320 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 RAB6AP20340 208 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 CRHBPP24387 322 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 MYL9P24844 172 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 CDK10Q15131 360 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 DEFB114Q30KQ6 69 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 CDNFQ49AH0 187 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 CLEC19AQ6UXS0 136 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 LINC00322Q6ZN03 302 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 KCTD9Q7L273 389 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 SSX9Q7RTT3 188 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 NR2C2APQ86WQ0 139 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 NECAP1Q8NC96 275 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 OSR1Q8TAX0 266 aaPredicted RBP6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 SPIN2AQ99865 258 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 SPIN2BQ9BPZ2 258 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZC4H2Q9NQZ6 224 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
CTDNEP1-203ENST00000570385 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 TRAV1-2A0A0B4J238 106 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 A0A1B0GW64 132 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 DPPA5A6NC42 116 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 METTL21EPA6NDL7 271 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 AIREO43918 545 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 GGCTO75223 188 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 JTBO76095 146 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 SCAF4O95104 1147 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 IGLV2-14P01704 120 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 REG1AP05451 166 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 FCER2P06734 321 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 IL6RP08887 468 aaPredicted RBP6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 AREGP15514 252 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 RAB3BP20337 219 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 KIR2DS2P43631 304 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 C22orf42Q6IC83 251 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF367Q7RTV3 350 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 ZNF645Q8N7E2 425 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR2K2Q8NGT1 345 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 NUDCD2Q8WVJ2 157 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 CNBD2Q96M20 576 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR51E2Q9H255 320 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 TAS2R8Q9NYW2 309 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 RBMX2Q9Y388 322 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
CTDNEP1-203ENST00000570385 CSMD3Q7Z407 3707 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms