RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 RBM7Q9Y580 266 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-211ENST00000569653 ANKRD34BA5PLL1 514 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 TMBIM6P55061 237 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 DYRK1AQ13627 763 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 H1FOOQ8IZA3 346 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 S100A16Q96FQ6 103 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 SLA2Q9H6Q3 261 aa10.58□□□□□ -0.72
GTF3C1-211ENST00000569653 XRCC3O43542 346 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 SSX5O60225 188 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 DUTP33316 252 aaKnown RBP10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 CBX3Q13185 183 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 CNIH2Q6PI25 160 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 IDO2Q6ZQW0 420 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 SAMD12Q8N8I0 201 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 RAB2BQ8WUD1 216 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 AUNIPQ9H7T9 357 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
GTF3C1-211ENST00000569653 H3BMQ9 156 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 H3BUA1 57 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 IGLV2-14P01704 120 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 CBX5P45973 191 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 ARPC4P59998 168 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 TAGLNQ01995 201 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 KLF5Q13887 457 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 TMEM69Q5SWH9 247 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 C10orf55Q5SWW7 151 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 ADAD2Q8NCV1 583 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 BEST4Q8NFU0 473 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 OR6Q1Q8NGQ2 317 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 ISOC1Q96CN7 298 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 THAP7Q9BT49 309 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 TINAGL1Q9GZM7 467 aaPredicted RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 GAR1Q9NY12 217 aaKnown RBP10.56□□□□□ -0.72
GTF3C1-211ENST00000569653 IGKV1D-13A0A0B4J2D9 117 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 J3QRK9 145 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 SLC22A5O76082 557 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 CNIH1O95406 144 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 BRI3O95415 125 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 CRYZL1O95825 349 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 PRH1P02810 166 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 IGKV1-13P0DP09 117 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 LGALS7P47929 136 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 RORCP51449 518 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 RPL30P62888 115 aaKnown RBP10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF45Q02386 682 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 PRSS8Q16651 343 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 RTL8BQ17RB0 113 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF343Q6P1L6 599 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF645Q8N7E2 425 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 DYNC2LI1Q8TCX1 351 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 ACOT12Q8WYK0 555 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 ADTRPQ96IZ2 230 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 BCL7BQ9BQE9 202 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 C19orf73Q9NVV2 129 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 OR2W1Q9Y3N9 320 aa10.55□□□□□ -0.72
GTF3C1-211ENST00000569653 C13orf42A0A1B0GVH6 325 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 IZUMO1RA6ND01 250 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 SHOXO15266 292 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 RRASP10301 218 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 NFYAP23511 347 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 SYNJ2BPP57105 145 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 TAS2R20P59543 309 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 UBE2KP61086 200 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 EIF4EBP1Q13541 118 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 HOGA1Q86XE5 327 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 AP3S1Q92572 193 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 CMTM3Q96MX0 182 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 OR4C12Q96R67 309 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 TM2D3Q9BRN9 247 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 RSRP1Q9BUV0 290 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF430Q9H8G1 570 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 RANGRFQ9HD47 186 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 IFT46Q9NQC8 304 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 COMMD3Q9UBI1 195 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 DNAH1Q9P2D7 4330 aa10.54□□□□□ -0.72
GTF3C1-211ENST00000569653 A0A1B0GW64 132 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 C3orf84H3BNL1 204 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 HLA-DQB1P01920 261 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 APOA1P02647 267 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 EIF4EP06730 217 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 CSN3P07498 182 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 ZNF182P17025 639 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 EDN2P20800 178 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 GVQW1Q8N7I0 195 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 TEX45Q8NA69 505 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 OR9G4Q8NGQ1 327 aa10.53□□□□□ -0.72
GTF3C1-211ENST00000569653 SRSF12Q8WXF0 261 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms