RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF581Q9P0T4 197 aa4.55□□□□□ -1.68
HERPUD1-217ENST00000569429 AASSQ9UDR5 926 aa4.55□□□□□ -1.68
HERPUD1-217ENST00000569429 KLK9Q9UKQ9 250 aa4.55□□□□□ -1.68
HERPUD1-217ENST00000569429 PUS1Q9Y606 427 aaKnown RBP eCLIP4.55□□□□□ -1.68
HERPUD1-217ENST00000569429 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 RPS10-NUDT3A0A1W2PQS6 291 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 K7EMT4 169 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 RS1O15537 224 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 OR7C1O76099 320 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 NUDT3O95989 172 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 OCM2P0CE71 109 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 OCMP0CE72 109 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 OSMP13725 252 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 SLC2A5P22732 501 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 TFPI2P48307 235 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 DEFB131AP59861 70 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 ID3Q02535 119 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 IRF3Q14653 427 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 GINS1Q14691 196 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 NHLRC3Q5JS37 347 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 TMEM69Q5SWH9 247 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF554Q86TJ5 538 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 STX19Q8N4C7 294 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 OR4K15Q8NH41 348 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 NRBF2Q96F24 287 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 RNF2Q99496 336 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 VCX3BQ9H321 246 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 TAF9BQ9HBM6 251 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 H2AFY2Q9P0M6 372 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 ST3GAL6Q9Y274 331 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF257Q9Y2Q1 563 aa4.54□□□□□ -1.68
HERPUD1-217ENST00000569429 IGHV3-35A0A0C4DH35 117 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 LOC107986453A0A1B0GWG9 222 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 SMIM9A6NGZ8 99 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 MAGEB4O15481 346 aaPredicted RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 HMGN1P05114 100 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 RCC1P18754 421 aaPredicted RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 GNRHRP30968 328 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 ALDH3B2P48448 385 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 DAPP51397 102 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 EMP1P54849 157 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 RPS7P62081 194 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 RCN1Q15293 331 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 KISS1Q15726 138 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 ZIK1Q3SY52 487 aaPredicted RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 TMEM236Q5W0B7 351 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 FAM90A2PQ658T7 463 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF322Q6U7Q0 402 aaPredicted RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 Q6ZSA8 131 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 BCDIN3DQ7Z5W3 292 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 PRSS35Q8N3Z0 413 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 IQCF1Q8N6M8 205 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF383Q8NA42 475 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 ZNF555Q8NEP9 628 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 FGGYQ96C11 551 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 FANCD2OSQ96PS1 177 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 OR2A7Q96R45 310 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 CIB1Q99828 191 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 SPIN2AQ99865 258 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 SPIN2BQ9BPZ2 258 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 RIBC2Q9H4K1 309 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 TVP23BQ9NYZ1 205 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 OAZ3Q9UMX2 235 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 GMPPBQ9Y5P6 360 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 S4R3C0 116 aa4.53□□□□□ -1.68
HERPUD1-217ENST00000569429 IGLV5-52A0A0A0MRZ9 124 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 ITGB1BP1O14713 200 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PROP1O75360 226 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 MAS1P04201 325 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 UBCP0CG48 685 aaKnown RBP4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 RPA2P15927 270 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 ATP6V1E1P36543 226 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CAPGP40121 348 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CXCR4P61073 352 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PAFAH1B2P68402 229 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CLINT1Q14677 625 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 TNXAQ16473 311 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PRSS8Q16651 343 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 MPV17LQ2QL34 196 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 ANKRD39Q53RE8 183 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PLET1Q6UQ28 207 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF705AQ6ZN79 300 aaPredicted RBP4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 SSX9Q7RTT3 188 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CPOQ8IVL8 374 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PQLC1Q8N2U9 271 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CBR4Q8N4T8 237 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF114Q8NC26 417 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 NEK7Q8TDX7 302 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 CXorf58Q96LI9 332 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 C9orf16Q9BUW7 83 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 PRRG3Q9BZD7 231 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 SMPXQ9UHP9 88 aa4.52□□□□□ -1.69
HERPUD1-217ENST00000569429 IGKV3-7A0A075B6H7 116 aa4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 TRAV2A0A0B4J234 112 aa4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 SRRM4A7MD48 611 aaKnown RBP4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 NPIPB5A8MRT5 1133 aa4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 ZNF705FA8MVS1 300 aaPredicted RBP4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 NDUFA4O00483 81 aa4.51□□□□□ -1.69
HERPUD1-217ENST00000569429 EI24O14681 340 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms