RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 C10orf71Q711Q0 1435 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 NACAE9PAV3 2078 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 C1orf167Q5SNV9 1468 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ODAMA1E959 279 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 TSPAN11A1L157 253 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 INS-IGF2F8WCM5 200 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 H0Y9J4 135 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ZNF593O00488 134 aaPredicted RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 CXCL1P09341 107 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 SLC35G6P0C7Q6 338 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 PET100P0DJ07 73 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 OR12D1P0DN82 309 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 INPP1P49441 399 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 C1QTNF8P60827 252 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RPS23P62266 143 aaKnown RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 MAD2L1BPQ15013 274 aaPredicted RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 GLT8D1Q68CQ7 371 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 FAM71E1Q6IPT2 247 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RPL22L1Q6P5R6 122 aaKnown RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 MUC15Q8N387 334 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 FER1L6-AS1Q8NA97 138 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 MDS2Q8NDY4 140 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 SLC30A7Q8NEW0 376 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ARL11Q969Q4 196 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 RPEQ96AT9 228 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 GALMQ96C23 342 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 SMARCD1Q96GM5 515 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 DMAC2Q9NW81 257 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 ABCC1P33527 1531 aa3.75□□□□□ -1.81
UBR1-208ENST00000569066 NUP214P35658 2090 aaPredicted RBP3.75□□□□□ -1.81
UBR1-208ENST00000569066 NFAT5O94916 1531 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 ZNF670-ZNF695F2Z2N8 137 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 F5H5P2 479 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 XRCC2O43543 280 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 PMCHP20382 165 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 DNASE1L1P49184 302 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 PPOXP50336 477 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 EIF5AP63241 154 aaKnown RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 LCN2P80188 198 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 OR2F1Q13607 317 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 OR1Q1Q15612 314 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TMEM42Q69YG0 159 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 OLIG3Q7RTU3 272 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 MKXQ8IYA7 352 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 Q8N976 141 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 CDRT4Q8N9R6 151 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 INO80EQ8NBZ0 244 aaPredicted RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 FNDC9Q8TBE3 224 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 HAVCR2Q8TDQ0 301 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 GPR119Q8TDV5 335 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 SLC25A2Q9BXI2 301 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 ULBP2Q9BZM5 246 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TMEM27Q9HBJ8 222 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TMEM100Q9NV29 134 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 MARF1Q9Y4F3 1742 aaKnown RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 DLC1Q96QB1 1528 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 A0A087WX48 190 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 A0A1W2PRS3 328 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 PINLYPA6NC86 204 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 OR6C6A6NF89 314 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 MFNGO00587 321 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 SERPINA7P05543 415 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TLX1NBP0CAT3 122 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 MPC1LP0DKB6 136 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 MDKP21741 143 aaPredicted RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 F2RP25116 425 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 GPR1P46091 355 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TPI1P60174 286 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 PTGES3Q15185 160 aaKnown RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 AADACL3Q5VUY0 350 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 ARL9Q6T311 187 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 NPWQ8N729 165 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 EEF1AKMT1Q8WVE0 214 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 ASB13Q8WXK3 278 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 TMEM230Q96A57 120 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 APOBEC3DQ96AK3 386 aaPredicted RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 MUCL1Q96DR8 90 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 CDCA4Q9BXL8 241 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 LINC00470Q9BZP3 86 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 SYT4Q9H2B2 425 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 EXOSC4Q9NPD3 245 aaKnown RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 MRPL27Q9P0M9 148 aaKnown RBP3.74□□□□□ -1.81
UBR1-208ENST00000569066 LAMTOR2Q9Y2Q5 125 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 ORC6Q9Y5N6 252 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 WSB1Q9Y6I7 421 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 LAMB2P55268 1798 aa3.74□□□□□ -1.81
UBR1-208ENST00000569066 GPATCH8Q9UKJ3 1502 aaKnown RBP3.73□□□□□ -1.81
UBR1-208ENST00000569066 RIMBP3CA6NJZ7 1639 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 RIMBP3BA6NNM3 1639 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 SMIM9A6NGZ8 99 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 GEMIN2O14893 280 aaKnown RBP3.73□□□□□ -1.81
UBR1-208ENST00000569066 ZNF207O43670 478 aaKnown RBP3.73□□□□□ -1.81
UBR1-208ENST00000569066 DRD3P35462 400 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 UBE2AP49459 152 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 H2BFSP57053 126 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 TAS2R43P59537 309 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 SLC36A2Q495M3 483 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 TMEM128Q5BJH2 165 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 SPANXN3Q5MJ09 141 aa3.73□□□□□ -1.81
UBR1-208ENST00000569066 EIF5AL1Q6IS14 154 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms