RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 OR4A47Q6IF82 309 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 WFDC3Q8IUB2 231 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 WDR89Q96FK6 387 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 OVOL2Q9BRP0 275 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
HERPUD1-215ENST00000568676 CXorf65A6NEN9 183 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 A8MWP6 167 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 DENRO43583 198 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 DHFRP00374 187 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 PRH1P02810 166 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 PSMA1P25786 263 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 IDO2Q6ZQW0 420 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 FAM3DQ96BQ1 224 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 RAB3CQ96E17 227 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 VCXQ9H320 206 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 DMRT1Q9Y5R6 373 aa11.81□□□□□ -0.52
HERPUD1-215ENST00000568676 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 NPIPB5A8MRT5 1133 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 OR2J3O76001 311 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 GSTT2P0CG29 244 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 GSTT2BP0CG30 244 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 SAA1P0DJI8 122 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 GADD45AP24522 165 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 TNFRSF9Q07011 255 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 C2orf76Q3KRA6 126 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 Q6ZS49 121 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 UFD1Q92890 307 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 C5orf30Q96GV9 206 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 RAB22AQ9UL26 194 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 MRPS7Q9Y2R9 242 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
HERPUD1-215ENST00000568676 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 SLC22A5O76082 557 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 OR2C1O95371 312 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 GNAO1P09471 354 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 BMI1P35226 326 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 MAS1LP35410 378 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 MED22Q15528 200 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 Q6ZWC4 215 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 MARC2Q969Z3 335 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 GFI1Q99684 422 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 KCNK7Q9Y2U2 307 aa11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 LSM2Q9Y333 95 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 AK6Q9Y3D8 172 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-215ENST00000568676 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 LINC00473A8K010 186 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 UBE2CO00762 179 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 CASQ2O14958 399 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 HIST1H1BP16401 226 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 CD36P16671 472 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 ARL3P36405 182 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 APOC4P55056 127 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 KLK9Q2XQG4 91 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 LIPKQ5VXJ0 399 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 H1FOOQ8IZA3 346 aaPredicted RBP11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 TMEM217Q8N7C4 229 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 ZNF645Q8N7E2 425 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 DCUN1D5Q9BTE7 237 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 V9GY05 133 aa11.78□□□□□ -0.52
HERPUD1-215ENST00000568676 TMEM213A2RRL7 107 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 HLA-AP01891 365 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 CRYGCP07315 174 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 GALP22466 123 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 PMS2P11Q13670 270 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 ARFRP1Q13795 201 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 OGFRL1Q5TC84 451 aaPredicted RBP11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 TMEM91Q6ZNR0 172 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 KCTD9Q7L273 389 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 OR10R2Q8NGX6 335 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 TMEM203Q969S6 136 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 SCN3BQ9NY72 215 aa11.77□□□□□ -0.53
HERPUD1-215ENST00000568676 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 TMEM272A0A1B0GTI8 110 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 ZNF320A2RRD8 509 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 MFNGO00587 321 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 FCGR3BO75015 233 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CTXN2P0C2S0 81 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 TALDO1P37837 337 aa11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 RPL27AP46776 148 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 ELLP55199 621 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-215ENST00000568676 CLDN12P56749 244 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms