RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RNF141Q8WVD5 230 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 HINT2Q9BX68 163 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 C11orf1Q9H5F2 150 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 SIRT7Q9NRC8 400 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 ZMAT5Q9UDW3 170 aaKnown RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 SESN1Q9Y6P5 492 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 PLXNB1O43157 2135 aa5.77□□□□□ -1.49
SMG1-215ENST00000568239 TET2Q6N021 2002 aaPredicted RBP5.77□□□□□ -1.49
SMG1-215ENST00000568239 hCG_1809904A0A1W2PP81 198 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PPE2 198 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PR64 198 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PRV1 198 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ANKRD34BA5PLL1 514 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 I3L521 148 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 RBFOX2O43251 390 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMG1-215ENST00000568239 C1QL1O75973 258 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 APOA2P02652 100 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OPN1MWP04001 364 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 GAPDHP04406 335 aaKnown RBP5.76□□□□□ -1.49
SMG1-215ENST00000568239 LIPFP07098 398 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OPN1MW2P0DN77 364 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OPN1MW3P0DN78 364 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 RRASP10301 218 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 HNF4GQ14541 408 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ZNF266Q14584 549 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 TGIF2LXQ8IUE1 241 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 UBAC2Q8NBM4 344 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OR1S2Q8NGQ3 325 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OR13D1Q8NGV5 346 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 SH3BGRL3Q9H299 93 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 PATZ1Q9HBE1 687 aaKnown RBP5.76□□□□□ -1.49
SMG1-215ENST00000568239 HSPB7Q9UBY9 170 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 LOC105371242A0A075B767 164 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 IGHV2-26A0A0B4J1V2 119 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 IGHV3-72A0A0B4J1Y9 119 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 FAM90A26D6RGX4 464 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ENSAO43768 121 aaKnown RBP5.76□□□□□ -1.49
SMG1-215ENST00000568239 HRASP01112 189 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 PRH1P02810 166 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 P0C879 139 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 SULT1A1P50225 295 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 BAXQ07812 192 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 OR4A47Q6IF82 309 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ZNF295-AS1Q8N0V1 137 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 TMEM186Q96B77 213 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 CCL19Q99731 98 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 BPESC1Q9GZL8 116 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 CSMD2Q7Z408 3487 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PRD5 423 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PRF3 423 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 A0A1W2PRM7 423 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 FSTL3O95633 263 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ATF4P18848 351 aaPredicted RBP5.76□□□□□ -1.49
SMG1-215ENST00000568239 PRRX1P54821 245 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 ZNF833PQ6ZTB9 187 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 PNKDQ8N490 385 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 SMIM8Q96KF7 97 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 HARBI1Q96MB7 349 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 CLCC1Q96S66 551 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 HRH4Q9H3N8 390 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 RFNGQ9Y644 331 aa5.76□□□□□ -1.49
SMG1-215ENST00000568239 POLQO75417 2590 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 SRRM4A7MD48 611 aaKnown RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 IL3RAP26951 378 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 HBG1P69891 147 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 HBG2P69892 147 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 LCN2P80188 198 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 RUNX1Q01196 453 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 FLYWCH2Q96CP2 140 aaKnown RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 CLEC7AQ9BXN2 247 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 HEYLQ9NQ87 328 aaPredicted RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 STRAPQ9Y3F4 350 aaKnown RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 CHD6Q8TD26 2715 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 VPS13CQ709C8 3753 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 H0YJW9 148 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 IFNA10P01566 189 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 IFNA5P01569 189 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 MYOD1P15172 320 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 BTF3P20290 206 aaKnown RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 HOXA1P49639 335 aaPredicted RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 RELBQ01201 579 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 ZNF616Q08AN1 781 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 ARL16Q0P5N6 197 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 TMEM182Q6ZP80 229 aaPredicted RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 LHX4Q969G2 390 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 CIB3Q96Q77 187 aaPredicted RBP5.75□□□□□ -1.49
SMG1-215ENST00000568239 ATP5SQ99766 215 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 LPAR2Q9HBW0 351 aa5.75□□□□□ -1.49
SMG1-215ENST00000568239 A0A087X0M5 115 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 A0A1B0GV50 99 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 A0A1B0GX30 115 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 DFFBO76075 338 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 FAM157CP0CG43 387 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 ATP6V0CP27449 155 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 TAS2R30P59541 319 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 AANATQ16613 207 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 HLA-DRB5Q30154 266 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 DHRS7BQ6IAN0 325 aaPredicted RBP5.74□□□□□ -1.49
SMG1-215ENST00000568239 MOB3BQ86TA1 216 aa5.74□□□□□ -1.49
SMG1-215ENST00000568239 OR5AN1Q8NGI8 311 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms