RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OPN1MWP04001 364 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 CD74P04233 296 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 RPLP1P05386 114 aaKnown RBP7.66□□□□□ -1.18
CLK3-220ENST00000567992 SAA1P0DJI8 122 aaPredicted RBP7.66□□□□□ -1.18
CLK3-220ENST00000567992 OPN1MW2P0DN77 364 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 OPN1MW3P0DN78 364 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 VDAC1P21796 283 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 PSMB8P28062 276 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 CD40LGP29965 261 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 TNFSF8P32971 234 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 HERV-K104P61576 105 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 FOXE3Q13461 319 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 KIAA0141Q14154 515 aaPredicted RBP7.66□□□□□ -1.18
CLK3-220ENST00000567992 PLGLAQ15195 96 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 ECSCRQ19T08 205 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 AADACL3Q5VUY0 350 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 PYHIN1Q6K0P9 492 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 TEX38Q6PEX7 206 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 ETV3LQ6ZN32 361 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 LHFPL1Q86WI0 220 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 OR4D10Q8NGI6 311 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 OR4S2Q8NH73 311 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 C15orf40Q8WUR7 153 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 DIRAS2Q96HU8 199 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 FAM103A1Q9BTL3 118 aaKnown RBP7.66□□□□□ -1.18
CLK3-220ENST00000567992 GON7Q9BXV9 100 aa7.66□□□□□ -1.18
CLK3-220ENST00000567992 RBFOX2O43251 390 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLK3-220ENST00000567992 CD3DP04234 171 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 ELANEP08246 267 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 TBPP20226 339 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 PPP5CP53041 499 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 MRPS10P82664 201 aaKnown RBP7.65□□□□□ -1.18
CLK3-220ENST00000567992 SSBP1Q04837 148 aaKnown RBP7.65□□□□□ -1.18
CLK3-220ENST00000567992 CBX3Q13185 183 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 IL18Q14116 193 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 OXA1LQ15070 435 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 PRSS8Q16651 343 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 ACTBL2Q562R1 376 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 KHDC1LQ5JSQ8 128 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 ASPHD1Q5U4P2 390 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 IDO2Q6ZQW0 420 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 VKORC1L1Q8N0U8 176 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 TEX45Q8NA69 505 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 TMEM229BQ8NBD8 167 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 OR4F17Q8NGA8 305 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 OR6F1Q8NGZ6 308 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 FCAMRQ8WWV6 532 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 ARPC1AQ92747 370 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 MRGPRFQ96AM1 343 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 R3HDM4Q96D70 268 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 OR4F4Q96R69 305 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 KLK15Q9H2R5 256 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 RABL2AQ9UBK7 228 aaPredicted RBP7.65□□□□□ -1.18
CLK3-220ENST00000567992 RABL2BQ9UNT1 228 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 PRELID3BQ9Y3B1 194 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 NUBP2Q9Y5Y2 271 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 V9GYH0 126 aa7.65□□□□□ -1.18
CLK3-220ENST00000567992 GSTZ1O43708 216 aaPredicted RBP7.64□□□□□ -1.19
CLK3-220ENST00000567992 PGLYRP1O75594 196 aaPredicted RBP7.64□□□□□ -1.19
CLK3-220ENST00000567992 RLN1P04808 185 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 ZNF735P0CB33 412 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 KIR2DS2P43631 304 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 BCAP31P51572 246 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 UCP3P55916 312 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 TAS2R19P59542 299 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 FXYD3Q14802 87 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 ZNF79Q15937 498 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 VMA21Q3ZAQ7 101 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 C8orf86Q6ZUL3 223 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 SPAG16Q8N0X2 631 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
CLK3-220ENST00000567992 ARRDC1Q8N5I2 433 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 LFNGQ8NES3 379 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 OR51H1Q8NH63 302 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 GRPEL2Q8TAA5 225 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
CLK3-220ENST00000567992 ZFP57Q9NU63 452 aa7.64□□□□□ -1.19
CLK3-220ENST00000567992 A0A1W2PN81 502 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 GPR31O00270 319 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 KBTBD11O94819 623 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 S1PR2O95136 353 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 IL6RP08887 468 aaPredicted RBP7.63□□□□□ -1.19
CLK3-220ENST00000567992 PF4V1P10720 104 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 CHRNA7P36544 502 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 ETV6P41212 452 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 CDX1P47902 265 aaPredicted RBP7.63□□□□□ -1.19
CLK3-220ENST00000567992 TSPAN5P62079 268 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 GNB1P62873 340 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 ZNF45Q02386 682 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 CATR1Q13166 79 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 POU2AF1Q16633 256 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 TRIM16LQ309B1 348 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 PHLDA2Q53GA4 152 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 AKIRIN2Q53H80 203 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 RNASE10Q5GAN6 216 aaKnown RBP7.63□□□□□ -1.19
CLK3-220ENST00000567992 CXorf66Q5JRM2 361 aaPredicted RBP7.63□□□□□ -1.19
CLK3-220ENST00000567992 C10orf55Q5SWW7 151 aa7.63□□□□□ -1.19
CLK3-220ENST00000567992 FAAP20Q6NZ36 180 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms