RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CAV2P51636 162 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 DLX6P56179 175 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 BRWD1-AS2P59051 145 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 AARDQ4LEZ3 155 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 MIDNQ504T8 468 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 Q6ZRM9 215 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 STX12Q86Y82 276 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 LYG1Q8N1E2 194 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 RNF141Q8WVD5 230 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 R3HDM4Q96D70 268 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 CIB3Q96Q77 187 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF251Q9BRH9 671 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 ARV1Q9H2C2 271 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 HSPB7Q9UBY9 170 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 PFDN2Q9UHV9 154 aa11.96□□□□□ -0.49
COMMD4-221ENST00000567935 SONP18583 2426 aaKnown RBP11.96□□□□□ -0.5
COMMD4-221ENST00000567935 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 CCL3L1P16619 93 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 IL3RAP26951 378 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 G6PCP35575 357 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 TNFRSF9Q07011 255 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 POU2AF1Q16633 256 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 OR2B11Q5JQS5 317 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 RPL7L1Q6DKI1 246 aaKnown RBP11.95□□□□□ -0.5
COMMD4-221ENST00000567935 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 TMEM186Q96B77 213 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 YLPM1P49750 1951 aaKnown RBP11.95□□□□□ -0.5
COMMD4-221ENST00000567935 DOCK11Q5JSL3 2073 aa11.95□□□□□ -0.5
COMMD4-221ENST00000567935 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
COMMD4-221ENST00000567935 MMP23AO75900 390 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 DFFBO76075 338 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 HRASP01112 189 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 GNG10P50151 68 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 ZNF137PP52743 207 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 STPG2Q8N412 459 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 OR9G1Q8NH87 305 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 LEAP2Q969E1 77 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
COMMD4-221ENST00000567935 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 IGSF23A1L1A6 192 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 FAM24AA6NFZ4 105 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 NUDT19A8MXV4 375 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 FGF16O43320 207 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 TXNL1O43396 289 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 SEC11BP0C7V7 166 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 IGHV1-8P0DP01 117 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 SULT1A1P50225 295 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 EFNA4P52798 201 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 PAX9P55771 341 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 UBE2KP61086 200 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 WDR25Q64LD2 544 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-221ENST00000567935 OR1S2Q8NGQ3 325 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 SAT2Q96F10 170 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-221ENST00000567935 GINS3Q9BRX5 216 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
COMMD4-221ENST00000567935 PSENENQ9NZ42 101 aa11.93□□□□□ -0.5
COMMD4-221ENST00000567935 J3QR06 171 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 TMEM50AO95807 157 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 APOA2P02652 100 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 RAB5CP51148 216 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 HBG1P69891 147 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 HBG2P69892 147 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 PDLIM3Q53GG5 364 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-221ENST00000567935 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 OR10X1Q8NGY0 326 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 TMED6Q8WW62 240 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
COMMD4-221ENST00000567935 A0A1W2PPE3 182 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 IGHV3-7P01780 117 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 LIPFP07098 398 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 SULT1A2P50226 295 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 PRRX1P54821 245 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 SPCS3P61009 180 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 NHLH2Q02577 135 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 IZUMO4Q1ZYL8 232 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 AVPI1Q5T686 147 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 ZNF429Q86V71 674 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
COMMD4-221ENST00000567935 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-221ENST00000567935 CLCC1Q96S66 551 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 SMIM3Q9BZL3 60 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 SLC35D1Q9NTN3 355 aa11.91□□□□□ -0.5
COMMD4-221ENST00000567935 MALRD1Q5VYJ5 2156 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms