RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 OR52M1Q8NGK5 317 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 RNASE11Q8TAA1 199 aaKnown RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 BCL2L2Q92843 193 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ERGIC1Q969X5 290 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 MALSU1Q96EH3 234 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SIGLEC12Q96PQ1 595 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TP53RKQ96S44 253 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ATP5SQ99766 215 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 SMIM3Q9BZL3 60 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 EIF5A2Q9GZV4 153 aaKnown RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TOLLIPQ9H0E2 274 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZDHHC11Q9H8X9 412 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 MAP6D1Q9H9H5 199 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 CDH20Q9HBT6 801 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 KCNIP1Q9NZI2 227 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 TAAR3PQ9P1P4 343 aa4.39□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF469Q96JG9 3925 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 FBN1P35555 2871 aaKnown RBP4.39□□□□□ -1.71
CAPN3-217ENST00000567817 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 NCOA6Q14686 2063 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 A0A087WWC5 75 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 TRAV24A0A0B4J272 114 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 TMEM30CPA0ZSE6 113 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 FAM166BA8MTA8 275 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IQCF6A8MYZ5 107 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 B4DEV8 164 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SH2D1BO14796 132 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 NUPL2O15504 423 aaKnown RBP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ADAM20O43506 726 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SSSCA1O60232 199 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SMPD2O60906 423 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IFNA1P01562 189 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IGHV3-9P01782 118 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IGHG3P01860 377 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 MBP02144 154 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 S100A6P06703 90 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SCTP09683 121 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF44P15621 663 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 PTAFRP25105 342 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ATP6V0CP27449 155 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 MAS1LP35410 378 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ERVK11-1P61568 191 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 POLR2GP62487 172 aaKnown RBP eCLIP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 CATR1Q13166 79 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 HERPUD1Q15011 391 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ATP6V1FQ16864 119 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ODF3L2Q3SX64 289 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IGSF11Q5DX21 431 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF766Q5HY98 468 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 DMRTC1Q5HYR2 192 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SOHLH1Q5JUK2 328 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 Q5PR19 223 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SLC25A24Q6NUK1 477 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF497Q6ZNH5 498 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 IQCF2Q8IXL9 164 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 WDR31Q8NA23 367 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 NAXEQ8NCW5 288 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 OR5C1Q8NGR4 320 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 OR11L1Q8NGX0 322 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 OR2G3Q8NGZ4 309 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 OR8U1Q8NH10 309 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SCGB1C1Q8TD33 95 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 CD300LFQ8TDQ1 290 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 CIB3Q96Q77 187 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 P2RX4Q99571 388 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 BCL2L14Q9BZR8 327 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SEBOXQ9HB31 216 aaPredicted RBP4.38□□□□□ -1.71
CAPN3-217ENST00000567817 RAB9BQ9NP90 201 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 SIRT7Q9NRC8 400 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 FAM96BQ9Y3D0 163 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 WIPI2Q9Y4P8 454 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 TIMM9Q9Y5J7 89 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 HIVEP2P31629 2446 aa4.38□□□□□ -1.71
CAPN3-217ENST00000567817 MXRA5Q9NR99 2828 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 TRAV17A0A0B4J275 112 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 IGSF23A1L1A6 192 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 C7orf77A4D0Y5 90 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 RBFOX3A6NFN3 312 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 FAM24AA6NFZ4 105 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 OOEPA6NGQ2 149 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 COLCA2A8K830 154 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 IFNL4K9M1U5 179 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 M0R036 132 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 HSD17B6O14756 317 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 AGPAT2O15120 278 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 TXNL1O43396 289 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 SYNGR1O43759 233 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 SYNGR2O43760 224 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 NGFP01138 241 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 IFNA17P01571 189 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 CRYBA1P05813 215 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 S100A9P06702 114 aaKnown RBP4.37□□□□□ -1.71
CAPN3-217ENST00000567817 SMIM6P0DI80 62 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 PGA5P0DJD9 388 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 CBR1P16152 277 aa4.37□□□□□ -1.71
CAPN3-217ENST00000567817 ZNF14P17017 642 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms