RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 THBS3P49746 956 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 TCL1AP56279 114 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 FAM216BQ8N7L0 139 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 FAM216AQ8WUB2 273 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 GTF3AQ92664 365 aaKnown RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 FAM103A1Q9BTL3 118 aaKnown RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 ONECUT1Q9UBC0 465 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 ZNF835Q9Y2P0 537 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 NPVFQ9HCQ7 196 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 ZNF331Q9NQX6 463 aaPredicted RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 TCF19Q9Y242 345 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 CREBBPQ92793 2442 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 NTF3P20783 257 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 GLRXP35754 106 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 LRRC75BQ2VPJ9 315 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 C9orf152Q5JTZ5 239 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 LILRB1Q8NHL6 650 aaPredicted RBP9.72□□□□□ -0.85
CDH1-210ENST00000566612 FLYWCH2Q96CP2 140 aaKnown RBP9.72□□□□□ -0.85
CDH1-210ENST00000566612 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 IGKV1-5P01602 117 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 CT45A6P0DMU7 189 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 CT45A5P0DMU8 189 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 CT45A7P0DMV0 189 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 LYL1P12980 280 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 RPL30P62888 115 aaKnown RBP9.72□□□□□ -0.85
CDH1-210ENST00000566612 CT45A1Q5HYN5 189 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 TGIF2LYQ8IUE0 185 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 TGIF2LXQ8IUE1 241 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 CT45A3Q8NHU0 189 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 TIMD4Q96H15 378 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 IGHV1-18A0A0C4DH31 117 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 LOC102723971A0A1B0GUV8 181 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 ZNF506Q5JVG8 444 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 TIMM23BQ5SRD1 257 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 TMEM18Q96B42 140 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 SPG11Q96JI7 2443 aa9.72□□□□□ -0.85
CDH1-210ENST00000566612 SEC14L6B5MCN3 397 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 PPIHO43447 177 aaKnown RBP9.71□□□□□ -0.85
CDH1-210ENST00000566612 LY86O95711 162 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 GNG4P50150 75 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 TNXAQ16473 311 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 CLDND2Q8NHS1 167 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 RPEQ96AT9 228 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 LURAP1Q96LR2 239 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 PCGF1Q9BSM1 259 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 PRNDQ9UKY0 176 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 IFNL4K9M1U5 179 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 TMEM50AO95807 157 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 CD3EP07766 207 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 PMS2P11Q13670 270 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 Q6P435 159 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 SLX1AQ9BQ83 275 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 GPR61Q9BZJ8 451 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 CTDSP1Q9GZU7 261 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 PARLQ9H300 379 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 TUBG2Q9NRH3 451 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 JPT1Q9UK76 154 aa9.71□□□□□ -0.85
CDH1-210ENST00000566612 C10orf142B7Z368 130 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 CHRNB4P30926 498 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 ICAM4Q14773 271 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
CDH1-210ENST00000566612 FAM157AC9JC47 383 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 BPIFB3P59826 476 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 UBE2L3P68036 154 aaKnown RBP9.71□□□□□ -0.86
CDH1-210ENST00000566612 ZNF146Q15072 292 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 PCSK4Q6UW60 755 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 C1orf174Q8IYL3 243 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 TCTEX1D1Q8N7M0 179 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 OR10G8Q8NGN5 311 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 PSMG3Q9BT73 122 aaPredicted RBP9.71□□□□□ -0.86
CDH1-210ENST00000566612 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.86
CDH1-210ENST00000566612 EYSQ5T1H1 3165 aa9.71□□□□□ -0.86
CDH1-210ENST00000566612 MLNRO43193 412 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 RBP4P02753 201 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 OR10J1P30954 320 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
CDH1-210ENST00000566612 KRTCAP3Q53RY4 240 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 ZNF705AQ6ZN79 300 aaPredicted RBP9.7□□□□□ -0.86
CDH1-210ENST00000566612 SGMS2Q8NHU3 365 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 CA5BP1Q8WTZ4 195 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 SMIM6P0DI80 62 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 SLC35B1P78383 322 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 RTP5Q14D33 572 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 NPCDR1Q9BY65 106 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 FCN1O00602 326 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 PLAUP00749 431 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 HSPE1P61604 102 aaKnown RBP9.7□□□□□ -0.86
CDH1-210ENST00000566612 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
CDH1-210ENST00000566612 C1orf162Q8NEQ5 155 aaPredicted RBP9.7□□□□□ -0.86
CDH1-210ENST00000566612 MS4A5Q9H3V2 200 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms