RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 EXOSC8Q96B26 276 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TBL1YQ9BQ87 522 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 PYGO2Q9BRQ0 406 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 DDA1Q9BW61 102 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 MS4A8Q9BY19 250 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 IFI27L2Q9H2X8 130 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 DAZ1Q9NQZ3 744 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM38BQ9NVV0 291 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TAS2R7Q9NYW3 318 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 RPS6KB2Q9UBS0 482 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ENOPH1Q9UHY7 261 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 RWDD2AQ9UIY3 292 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ANAPC10Q9UM13 185 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 NEU3Q9UQ49 428 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 PRSS21Q9Y6M0 314 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 CENPFP49454 3210 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ASH1LQ9NR48 2969 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM208BQ5VWN6 2430 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 BRCA2P51587 3418 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 KNDC1Q76NI1 1749 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 FLNBO75369 2602 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 LMTK2Q8IWU2 1503 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 DUOX2Q9NRD8 1548 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 RANBP2P49792 3224 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV3-64DA0A0J9YX35 117 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 hADV38S2A0JD32 116 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 A8MWL6 223 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR11H12B2RN74 326 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 TMX2-CTNND1H3BSU7 103 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 GPR31O00270 319 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 BPY2O14599 106 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PHOX2AO14813 284 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 SRSF10O75494 262 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 POP7O75817 140 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 GPR75O95800 540 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 HMGN1P05114 100 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PFN1P07737 140 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 GUSBP08236 651 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 INAFM2P0DMQ5 153 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF823P16415 610 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 CA7P43166 264 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF133P52736 654 aaPredicted RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 LINC00313P59037 77 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 TPI1P60174 286 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 RPS20P60866 119 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ESRRGP62508 458 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PSG7Q13046 419 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 SMCO1Q147U7 214 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PDGFRLQ15198 375 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 LINC00303Q3SY05 128 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ZFP1Q6P2D0 407 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 KRTAP7-1Q8IUC3 87 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 C1orf174Q8IYL3 243 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 C1orf158Q8N1D5 194 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PACRGLQ8N7B6 248 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR11H1Q8NG94 326 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR13D1Q8NGV5 346 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR11H2Q8NH07 326 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR8S1Q8NH09 359 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 OR10J5Q8NHC4 309 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 RBPMSQ93062 196 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 MAL2Q969L2 176 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 C12orf43Q96C57 262 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF799Q96GE5 643 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 CNBD2Q96M20 576 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 GINS3Q9BRX5 216 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM147Q9BVK8 224 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 PLA2G12AQ9BZM1 189 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 RPP21Q9H633 154 aaKnown RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 MED29Q9NX70 200 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 FIS1Q9Y3D6 152 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 LRP4O75096 1905 aa2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 USP9XQ93008 2570 aaPredicted RBP2.28□□□□□ -2.04
HERPUD1-211ENST00000566550 ATP7BP35670 1465 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CLIP1P30622 1438 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 MTUS2Q5JR59 1369 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 AKAP11Q9UKA4 1901 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TUBGCP6Q96RT7 1819 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 TRBV6-6A0A0A6YYG2 114 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 NKX2-6A6NCS4 301 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 OR4C45A6NMZ5 311 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 G3V2T6 193 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 H3BSA7 217 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 OR7C2O60412 319 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 DHFRP00374 187 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 NRASP01111 189 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 HRASP01112 189 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 KRASP01116 189 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 LTAP01374 205 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 HLA-DRB1P01911 266 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CRYGDP07320 174 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 ADRA2AP08913 450 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 NBEAP1P0C6P0 100 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 SULT1A3P0DMM9 295 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 SULT1A4P0DMN0 295 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 CPMP14384 443 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 SNRPD2P62316 118 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 GNG5P63218 68 aa2.27□□□□□ -2.05
HERPUD1-211ENST00000566550 ELF3P78545 371 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms