RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 WDR89Q96FK6 387 aaPredicted RBP15.45■□□□□ 0.06
CSPG4P13-201ENST00000565545 COA4Q9NYJ1 87 aa15.45■□□□□ 0.06
CSPG4P13-201ENST00000565545 TBL2Q9Y4P3 447 aaKnown RBP15.45■□□□□ 0.06
CSPG4P13-201ENST00000565545 WNK2Q9Y3S1 2297 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 FAM90A9PA6NNJ1 464 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 G3V3Q6 166 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 H0YJW9 148 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 HRASP01112 189 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 IGKV1-5P01602 117 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 FAM157CP0CG43 387 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 PET100P0DJ07 73 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 LGALS4P56470 323 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 ERVK-16P61578 105 aa15.44■□□□□ 0.06
CSPG4P13-201ENST00000565545 MPC2O95563 127 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 CRYZL1O95825 349 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 KRASP01116 189 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 P0C879 139 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 SLC25A4P12235 298 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 KLRD1Q13241 179 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 SMCO1Q147U7 214 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 POU2AF1Q16633 256 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 TPTE2P1Q5T6R2 138 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 H2BFWTQ7Z2G1 175 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 OR8H3Q8N146 312 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 OR4D5Q8NGN0 318 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 OSR1Q8TAX0 266 aaPredicted RBP15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 THAP6Q8TBB0 222 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 CDC42EP3Q9UKI2 254 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 WASHC3Q9Y3C0 194 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 AUP1Q9Y679 476 aa15.43■□□□□ 0.06
CSPG4P13-201ENST00000565545 IGHV1-3A0A0C4DH29 117 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 MARCH11A6NNE9 402 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 HMSDA8MTL9 139 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 J3QLI3 93 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 PITX3O75364 302 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 RLN2P04090 185 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 G6PCP35575 357 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 REG1BP48304 166 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 PRB3Q04118 309 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 DIAPH2-AS1Q14236 149 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 MIDNQ504T8 468 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 TMEM177Q53S58 311 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 Q5BKY6 102 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 C11orf87Q6NUJ2 197 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 TMEM65Q6PI78 240 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 LHX4Q969G2 390 aa15.42■□□□□ 0.06
CSPG4P13-201ENST00000565545 TRAV14DV4A0A0A6YYC5 116 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 A0A0G2JRQ6 117 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 H7C2Y5 167 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 ST8SIA3O43173 380 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 TMEM249Q2WGJ8 235 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 CCDC144NLQ6NUI1 221 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 DMBX1Q8NFW5 382 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 OR11H4Q8NGC9 324 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 OR4C13Q8NGP0 309 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 OR1S1Q8NH92 325 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 FLYWCH2Q96CP2 140 aaKnown RBP15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 HIF1ANQ9NWT6 349 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 CACNG5Q9UF02 275 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 CACFD1Q9UGQ2 172 aa15.41■□□□□ 0.06
CSPG4P13-201ENST00000565545 NBEAL1Q6ZS30 2694 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 FAM90A26D6RGX4 464 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 LYL1P12980 280 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 NKX2-1P43699 371 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 ID3Q02535 119 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 RAB32Q13637 225 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 LRRC37A5PQ49AS3 106 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 PRSS54Q6PEW0 395 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 MOB3BQ86TA1 216 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 MALSU1Q96EH3 234 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 RNF5Q99942 180 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 C7orf69Q9H7B7 122 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 POMT1Q9Y6A1 747 aa15.4■□□□□ 0.06
CSPG4P13-201ENST00000565545 SHOXO15266 292 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 MBPP02686 304 aaPredicted RBP15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 CD1BP29016 333 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 LGALS7P47929 136 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 HABP2Q14520 560 aaPredicted RBP15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 Q6ZRM9 215 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 RHOVQ96L33 236 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 CR1P17927 2039 aa15.39■□□□□ 0.05
CSPG4P13-201ENST00000565545 FXYD6-FXYD2A0A087WZ82 144 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 CENPVL3A0A0U1RRI6 287 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 A0A1W2PPI3 338 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 K7EPK0 472 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 HAX1O00165 279 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 SCGB1D2O95969 90 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 S100A10P60903 97 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 LDLRAD2Q5SZI1 272 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 PDZD9Q8IXQ8 264 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 FAM71E2Q8N5Q1 922 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 RNF126Q9BV68 326 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 TMEM140Q9NV12 185 aa15.38■□□□□ 0.05
CSPG4P13-201ENST00000565545 IGHV1-69DA0A0B4J2H0 117 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 NPFFO15130 113 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 DEDDO75618 318 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 IGHV1-69P01742 117 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 IGKV1-16P04430 117 aa15.37■□□□□ 0.05
CSPG4P13-201ENST00000565545 IGHV4-31P0DP07 118 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms