RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TNFSF8P32971 234 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 DUTP33316 252 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 TAGLNQ01995 201 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 TMEM267Q0VDI3 215 aaPredicted RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 CBX3Q13185 183 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 ACTBL2Q562R1 376 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 OR1N2Q8NGR9 330 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 OR52I2Q8NH67 350 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 DDB2Q92466 427 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 ADTRPQ96IZ2 230 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 UBE2E2Q96LR5 201 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 RNF5Q99942 180 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 ZNF355PQ9NSJ1 428 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 MTFP1Q9UDX5 166 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 RBMX2Q9Y388 322 aaKnown RBP10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
VPS9D1-204ENST00000565023 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 GABARAPH6UMI1 98 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 ARPC1BO15143 372 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 HRH1P35367 487 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 TPPP2P59282 170 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 PJVKQ0ZLH3 352 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 KIAA0141Q14154 515 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 FXYD3Q14802 87 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 MSMO1Q15800 293 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 RTL8BQ17RB0 113 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 OR2B11Q5JQS5 317 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 PYHIN1Q6K0P9 492 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 MINDY2Q8NBR6 621 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 FCAMRQ8WWV6 532 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 KLK11Q9UBX7 282 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
VPS9D1-204ENST00000565023 LINC00473A8K010 186 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 CTDSPLO15194 276 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 SPDEFO95238 335 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 CRYZL1O95825 349 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 IGLV2-23P01705 113 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 APELAP0DMC3 54 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 DGCR2P98153 550 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 SSBP1Q04837 148 aaKnown RBP10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 ZNF616Q08AN1 781 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 IL18Q14116 193 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 RNASE12Q5GAN4 147 aaKnown RBP10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 C9orf66Q5T8R8 295 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 ZNF562Q6V9R5 426 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 OR5T1Q8NG75 326 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 MYOZ3Q8TDC0 251 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 SMIM4Q8WVI0 70 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 SECTM1Q8WVN6 248 aa10.58□□□□□ -0.72
VPS9D1-204ENST00000565023 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 I3L521 148 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 TRGV3P03979 118 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 RRASP10301 218 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 TBPP20226 339 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 ECI1P42126 302 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 SLURP1P55000 103 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 FXYD4P59646 89 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 HERV-K104P61576 105 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 DEFA5Q01523 94 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 EGFEM1PQ0D2K5 195 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 ASPHD1Q5U4P2 390 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 ZNF66Q6ZN08 573 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 IDO2Q6ZQW0 420 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 ZBTB34Q8NCN2 500 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 OR6F1Q8NGZ6 308 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 MOB3AQ96BX8 217 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 PRR25Q96S07 402 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 HSD17B10Q99714 261 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 ZNF2Q9BSG1 426 aaPredicted RBP10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 SLC5A7Q9GZV3 580 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 CCL28Q9NRJ3 127 aa10.57□□□□□ -0.72
VPS9D1-204ENST00000565023 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 A0A087WW49 117 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 FABP12A6NFH5 140 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 FCGR3BO75015 233 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 OR8U8P0C7N1 319 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 CD40LGP29965 261 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 LGALS7P47929 136 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 RPL30P62888 115 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 FHL3Q13643 280 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 TNXAQ16473 311 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 KCTD9Q7L273 389 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 TMEM17Q86X19 198 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 TCTEX1D1Q8N7M0 179 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 PHB2Q99623 299 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 TAS2R8Q9NYW2 309 aa10.56□□□□□ -0.72
VPS9D1-204ENST00000565023 LINC01619G3V211 115 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms