RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 QTRT1Q9BXR0 403 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 HSPB7Q9UBY9 170 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 PMS2P5A8MQ11 134 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SIAH2O43255 324 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 CXCL12P48061 93 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 BRWD1-AS2P59051 145 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 WNT10AQ9GZT5 417 aa17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OPN3Q9H1Y3 402 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MLNRO43193 412 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 EPHA8P29322 1005 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 GNG10P50151 68 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 MSMO1Q15800 293 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SPATA31B1PQ5VZV4 182 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 C11orf42Q8N5U0 333 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OR10G8Q8NGN5 311 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SNURFLB1AK76 121 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 ACTL6BO94805 426 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 RAC2P15153 192 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TMEM11P17152 192 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 GABRA2P47869 451 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TPPP2P59282 170 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SCCPDHQ8NBX0 429 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OR5AU1Q8NGC0 362 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SSTR5P35346 364 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 FXYD3Q14802 87 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 SRSF7Q16629 238 aaKnown RBP eCLIP17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 TMEM144Q7Z5S9 345 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 OR1L6Q8NGR2 347 aa17.15■□□□□ 0.34
MAP1LC3B-206ENST00000564844 HEATR1Q9H583 2144 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 HCFC1P51610 2035 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LINC00473A8K010 186 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 CELA3BP08861 270 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LCN2P80188 198 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 AARDQ4LEZ3 155 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LYSMD4Q5XG99 296 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ERASQ7Z444 233 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ABHD12Q8N2K0 398 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 KCNE4Q8WWG9 221 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 R3HDM4Q96D70 268 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 POM121L2Q96KW2 1035 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MIEN1Q9BRT3 115 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 SH2D2AQ9NP31 389 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 VENTXO95231 258 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 SAXO1Q8IYX7 474 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FAM19A2Q8N3H0 131 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FOXJ2Q9P0K8 574 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 PSG11Q9UQ72 335 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TIMM9Q9Y5J7 89 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ZNF318Q5VUA4 2279 aa17.14■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FOXH1O75593 365 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 CD1BP29016 333 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FOLR3P41439 243 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 PDLIM3Q53GG5 364 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 OR8I2Q8N0Y5 310 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 PHF7Q9BWX1 381 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FBXL7Q9UJT9 491 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ATMQ13315 3056 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LOC102723996A0A087X1L8 192 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 C12orf77C9JDV5 145 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TOX3O15405 576 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ZNF497Q6ZNH5 498 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 FZR1Q9UM11 496 aa17.13■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TIMP3P35625 211 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LHX2P50458 406 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 PSG7Q13046 419 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 YTHDF2Q9Y5A9 579 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 NTF3P20783 257 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 RPL31P62899 125 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 DNAJC4Q9NNZ3 241 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 C17orf112F2Z3M2 114 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 K7EN84 100 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TNFSF13O75888 250 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 TMEM183BQ1AE95 376 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 OR2Y1Q8NGV0 311 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 NINJ1Q92982 152 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 GALMQ96C23 342 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 CIB3Q96Q77 187 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 HINT2Q9BX68 163 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 HEYLQ9NQ87 328 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 KCNIP1Q9NZI2 227 aa17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MRPS17Q9Y2R5 130 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-206ENST00000564844 EDDM3AQ14507 147 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ACSF3Q4G176 576 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MAFAQ8NHW3 353 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 NEURL1O76050 574 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 HBZP02008 142 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 OR9G9P0C7N8 305 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 RAB7AP51149 207 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 DOLPP1Q86YN1 238 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 SIGLECL1Q8N7X8 197 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 LRFN3Q9BTN0 628 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 STRADBQ9C0K7 418 aa17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 ZNF703Q9H7S9 590 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-206ENST00000564844 C15orf62A8K5M9 175 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 MAGEA5P43359 124 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 AMTP48728 403 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 CYB561P49447 251 aa17.1■□□□□ 0.33
MAP1LC3B-206ENST00000564844 C16orf54Q6UWD8 224 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms