RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 CEACAM4O75871 244 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 HPRT1P00492 218 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 IGHV2-70P01814 119 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 S100PP25815 95 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 GPR12P47775 334 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 LTC4SQ16873 150 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 PDLIM3Q53GG5 364 aaPredicted RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 GCSAMQ8N6F7 178 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
HERC2-207ENST00000564734 BOD1L1Q8NFC6 3051 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 F2RL2O00254 374 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 MGST3O14880 152 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 PYY3Q5JQD4 70 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 HIST3H2BBQ8N257 126 aa12.64□□□□□ -0.39
HERC2-207ENST00000564734 KLK10O43240 276 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 FCGR3BO75015 233 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 SOD3P08294 240 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 ZNF134P52741 427 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 PARLQ9H300 379 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 PTPRQQ9UMZ3 2332 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 C17orf112F2Z3M2 114 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
HERC2-207ENST00000564734 LHBP01229 141 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 CGB3P0DN86 165 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 CGB7P0DN87 165 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 VDAC2P45880 294 aaPredicted RBP12.63□□□□□ -0.39
HERC2-207ENST00000564734 TLE1Q04724 770 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 C16orf82Q7Z2V1 217 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 GAR1Q9NY12 217 aaKnown RBP12.63□□□□□ -0.39
HERC2-207ENST00000564734 DUSP13Q9UII6 198 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 ZFHX4Q86UP3 3567 aa12.63□□□□□ -0.39
HERC2-207ENST00000564734 ELOA3CA0A087WX78 387 aaPredicted RBP12.62□□□□□ -0.39
HERC2-207ENST00000564734 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■□□□ 13.3
HERC2-207ENST00000564734 LY86O95711 162 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 IGHV3-13P01766 116 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 ADIRFQ15847 76 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 TMEM249Q2WGJ8 235 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
HERC2-207ENST00000564734 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 SPCS3P61009 180 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 C1orf229Q6ZS94 237 aaPredicted RBP12.62□□□□□ -0.39
HERC2-207ENST00000564734 IGHV3OR15-7A0A075B7D8 119 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 CD1BP29016 333 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 DEFB109BQ30KR1 87 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 ACOT6Q3I5F7 207 aaPredicted RBP12.62□□□□□ -0.39
HERC2-207ENST00000564734 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 OR4F5Q8NH21 305 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 DDB2Q92466 427 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 PLPPR2Q96GM1 343 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 OR4F4Q96R69 305 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 GNG12Q9UBI6 72 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
HERC2-207ENST00000564734 NBASA2RRP1 2371 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 PAGE4O60829 102 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 DEFA4P12838 97 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 NPPCP23582 126 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 NKX6-1P78426 367 aaPredicted RBP12.61□□□□□ -0.39
HERC2-207ENST00000564734 USF3Q68DE3 2245 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 M0R1X1 148 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 RELBQ01201 579 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 UTF1Q5T230 341 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 PPP1R35Q8TAP8 253 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
HERC2-207ENST00000564734 CDC34P49427 236 aaPredicted RBP12.6□□□□□ -0.39
HERC2-207ENST00000564734 ZNF83P51522 516 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 TMPRSS3P57727 454 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 ZNF474Q6S9Z5 364 aaPredicted RBP12.6□□□□□ -0.39
HERC2-207ENST00000564734 ZNRF1Q8ND25 227 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 TMEM170AQ8WVE7 144 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 RAB1CQ92928 201 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 OR2V2Q96R30 315 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 NCOR1P1Q9H4R4 102 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 SMCO3A2RU48 225 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 S100A2P29034 98 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 GCSAMLQ5JQS6 135 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 PRAMEF5Q5TYX0 476 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 OR10A7Q8NGE5 316 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 NEIL1Q96FI4 390 aaPredicted RBP12.6□□□□□ -0.39
HERC2-207ENST00000564734 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 ITGB1BP1O14713 200 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 RRHO14718 337 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 SLC31A2O15432 143 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 C17orf58Q2M2W7 97 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 SSX9Q7RTT3 188 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 MOGAT3Q86VF5 341 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
HERC2-207ENST00000564734 PRR14LQ5THK1 2151 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms