RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
RAB40C-208ENST00000564703 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 PARP11Q9NR21 331 aa12.61□□□□□ -0.39
RAB40C-208ENST00000564703 TCRBV4S1A1TA0A5B7 111 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 M0QZ24 198 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 OPN1MWP04001 364 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 IGF1P05019 195 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 OPN1MW2P0DN77 364 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 OPN1MW3P0DN78 364 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 CD28P10747 220 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 F2RP25116 425 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 PPP5CP53041 499 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 GNB1P62873 340 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 FXYD3Q14802 87 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF79Q15937 498 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 CNPY1Q3B7I2 92 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF57Q68EA5 555 aaPredicted RBP12.6□□□□□ -0.39
RAB40C-208ENST00000564703 TEX38Q6PEX7 206 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 LHFPL1Q86WI0 220 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 OR4C16Q8NGL9 310 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 SCGB3A2Q96PL1 93 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 COPZ2Q9P299 210 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 C14orf166Q9Y224 244 aaKnown RBP12.6□□□□□ -0.39
RAB40C-208ENST00000564703 WSB1Q9Y6I7 421 aa12.6□□□□□ -0.39
RAB40C-208ENST00000564703 TENM1Q9UKZ4 2725 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 ATP6V0E1O15342 81 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 OR2A4O95047 310 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 CA2P00918 260 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 ZNF735P0CB33 412 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 ERVK-16P61578 105 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 TRIQKQ629K1 86 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 FAAP20Q6NZ36 180 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 TBC1D26Q86UD7 250 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 OR51S1Q8NGJ8 323 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 MARCH1Q8TCQ1 289 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 DEDD2Q8WXF8 326 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 RHOVQ96L33 236 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 OR2A7Q96R45 310 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 SRRQ9GZT4 340 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 PLEKHA2Q9HB19 425 aa12.59□□□□□ -0.39
RAB40C-208ENST00000564703 PLXNB1O43157 2135 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 TRAV41A0A0B4J266 112 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 MPPED1O15442 326 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 RAMP3O60896 148 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 CRYGBP07316 175 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 SAA1P0DJI8 122 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-208ENST00000564703 NQO2P16083 231 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 CD40LGP29965 261 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 LPAR6P43657 344 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 PIGPP57054 158 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 TAS2R31P59538 309 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 SURF2Q15527 256 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-208ENST00000564703 KHDC1LQ5JSQ8 128 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 TMEM65Q6PI78 240 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 IDO2Q6ZQW0 420 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 LINC00299Q6ZSB3 139 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 NDUFA11Q86Y39 141 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 DMBX1Q8NFW5 382 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-208ENST00000564703 CITED2Q99967 270 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-208ENST00000564703 HRASLSQ9HDD0 168 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 SLC2A9Q9NRM0 540 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 ZNF580Q9UK33 172 aa12.58□□□□□ -0.4
RAB40C-208ENST00000564703 TET2Q6N021 2002 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-208ENST00000564703 SERPINE2P07093 398 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 CTSDP07339 412 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-208ENST00000564703 PI3P19957 117 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 RND3P61587 244 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 CD83Q01151 205 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 PJVKQ0ZLH3 352 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 TNXAQ16473 311 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 PRSS8Q16651 343 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 C2orf68Q2NKX9 166 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 CXorf66Q5JRM2 361 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-208ENST00000564703 UNQ5815/PRO19632Q6UWF5 114 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 VKORC1L1Q8N0U8 176 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 OR13C8Q8NGS7 320 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 OR4A5Q8NH83 315 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 GRPEL2Q8TAA5 225 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 ARPC1AQ92747 370 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 PHB2Q99623 299 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 TPSG1Q9NRR2 321 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-208ENST00000564703 TSSC4Q9Y5U2 329 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-208ENST00000564703 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
RAB40C-208ENST00000564703 TEX13DA0A0J9YY54 714 aaPredicted RBP12.56□□□□□ -0.4
RAB40C-208ENST00000564703 CENPXA8MT69 81 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 G3V318 75 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 ELANEP08246 267 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 KLF9Q13886 244 aaPredicted RBP12.56□□□□□ -0.4
RAB40C-208ENST00000564703 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 LFNGQ8NES3 379 aa12.56□□□□□ -0.4
RAB40C-208ENST00000564703 S100ZQ8WXG8 99 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms