RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TMEM106BQ9NUM4 274 aa6.12□□□□□ -1.43
MAP1LC3B-205ENST00000564638 IDI2-AS1Q9NZ38 188 aa6.12□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SLC25A10Q9UBX3 287 aaPredicted RBP6.12□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CLN8Q9UBY8 286 aa6.12□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PPIAL4AQ9Y536 164 aa6.12□□□□□ -1.43
MAP1LC3B-205ENST00000564638 YLPM1P49750 1951 aaKnown RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 FAM90A9PA6NNJ1 464 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LINC00473A8K010 186 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 UMAD1C9J7I0 102 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 H3BP45 60 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RBMXL2O75526 392 aaKnown RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SCAF4O95104 1147 aaKnown RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LY86O95711 162 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TSPAN15O95858 294 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 HPRT1P00492 218 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 KRASP01116 189 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 APOC3P02656 99 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NFYBP25208 207 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ATP6V0CP27449 155 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DUTP33316 252 aaKnown RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 THBS3P49746 956 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ARHGDIBP52566 201 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 EFNA4P52798 201 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PAX9P55771 341 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 UBE2KP61086 200 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 MEF2CQ06413 473 aaPredicted RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TNFRSF9Q07011 255 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF616Q08AN1 781 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CLEC12BQ2HXU8 276 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DUX4L9Q6RFH8 374 aaPredicted RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CLEC2AQ6UVW9 174 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 BTNL8Q6UX41 500 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TMEM182Q6ZP80 229 aaPredicted RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LILRB2Q8N423 598 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF525Q8N782 197 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TMEM217Q8N7C4 229 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LFNGQ8NES3 379 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 OR10A7Q8NGE5 316 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 OR2G3Q8NGZ4 309 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 OR4S2Q8NH73 311 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SUN5Q8TC36 379 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SCGB1C1Q8TD33 95 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CORO2AQ92828 525 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RAB39BQ96DA2 213 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ADTRPQ96IZ2 230 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CLCC1Q96S66 551 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 S1PR3Q99500 378 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TSNAXQ99598 290 aaKnown RBP6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SH3BGRL3Q9H299 93 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RBKSQ9H477 322 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NARFLQ9H6Q4 476 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 C19orf12Q9NSK7 152 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DCAF16Q9NXF7 216 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 HSPB7Q9UBY9 170 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CACFD1Q9UGQ2 172 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 GAB2Q9UQC2 676 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LINC00312Q9Y6C7 94 aa6.11□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZANQ9Y493 2812 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TMEM218A2RU14 115 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CEBPZOSA8MTT3 80 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LYNX1G3V0Z9 82 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SMAD7O15105 426 aaKnown RBP6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NDUFB3O43676 98 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 FCGR3BO75015 233 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SCO1O75880 301 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 F12P00748 615 aaPredicted RBP6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LYNX1P0DP58 116 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DAOP14920 347 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PAX1P15863 534 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PDLIM4P50479 330 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SLC38A11Q08AI6 406 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RPL39P5Q59GN2 51 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LRRC10Q5BKY1 277 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 AKR1C8PQ5T2L2 129 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PRAMEF5Q5TYX0 476 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NCR3LG1Q68D85 454 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DPPA3Q6W0C5 159 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TCF23Q7RTU1 214 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PRIMA1Q86XR5 153 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TGIF2LYQ8IUE0 185 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 KRTAP1-3Q8IUG1 177 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ODF3L1Q8IXM7 274 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 FAM213BQ8TBF2 198 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NEU4Q8WWR8 484 aaPredicted RBP6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CCL17Q92583 94 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 GSX1Q9H4S2 264 aaPredicted RBP6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LINC00574Q9H8X3 128 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PLA2G2EQ9NZK7 142 aa6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RPUSD1Q9UJJ7 312 aaKnown RBP6.1□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ANK2Q01484 3957 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SAA2-SAA4A0A096LPE2 208 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 IGHV1-69-2A0A0G2JMI3 117 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 BTBD17A6NE02 478 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 F8W036 122 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 AGPAT2O15120 278 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SLC31A2O15432 143 aa6.09□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NDUFA2O43678 99 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms