RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CYBAP13498 195 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 PSME3P61289 254 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 HIST1H3AP68431 136 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 RPL19P84098 196 aaKnown RBP1.69□□□□□ -2.14
UBR1-205ENST00000564540 H3F3AP84243 136 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 PLPPR5Q32ZL2 321 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 LIN52Q52LA3 116 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 TMEM69Q5SWH9 247 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 C10orf91Q5T1B1 145 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 WDR59Q6PJI9 974 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 TMED4Q7Z7H5 227 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 BAP18Q8IXM2 172 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 ZFAND2AQ8N6M9 145 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 GNPNAT1Q96EK6 184 aaPredicted RBP1.69□□□□□ -2.14
UBR1-205ENST00000564540 C1QTNF6Q9BXI9 259 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 ULBP3Q9BZM4 244 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 TRIM4Q9C037 500 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 RNASE7Q9H1E1 156 aaKnown RBP1.69□□□□□ -2.14
UBR1-205ENST00000564540 C14orf105Q9NVL8 296 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 ARMC1Q9NVT9 282 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 DOK5Q9P104 306 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 SLC23A2Q9UGH3 650 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 U3KQK5 164 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 BAZ1BQ9UIG0 1483 aaKnown RBP1.69□□□□□ -2.14
UBR1-205ENST00000564540 ZNF532Q9HCE3 1301 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CRB1P82279 1406 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 NCOA1Q15788 1441 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 A0A0B4J2C4 111 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 A0A1B0GV50 99 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 LINC00862A6NCI5 91 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 FAM159BA6NKW6 160 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 KNCNA6PVL3 124 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 H0YJX3 145 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 FAAHO00519 579 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 COX7A2LO14548 114 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 LECT2O14960 151 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 GSTZ1O43708 216 aaPredicted RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 SH2D1AO60880 128 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 IGHG2P01859 326 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CD7P09564 240 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 RPL5P46777 297 aaKnown RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 CRYBA4P53673 196 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 DEFA1P59665 94 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 RPS20P60866 119 aaKnown RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 RAB14P61106 215 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 OR8G1Q15617 311 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 KCNJ8Q15842 424 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 IAH1Q2TAA2 248 aaPredicted RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 PYCR3Q53H96 274 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 LDLRAD2Q5SZI1 272 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 SLC36A1Q7Z2H8 476 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 C20orf196Q8IYI0 205 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 PACRGLQ8N7B6 248 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 SGMS2Q8NHU3 365 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 LMX1AQ8TE12 382 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 FAM172AQ8WUF8 416 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 RNASE6Q93091 150 aaKnown RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 BORCS7Q96B45 105 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 MS4A6EQ96DS6 147 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CPNE2Q96FN4 548 aaPredicted RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 BTF3L4Q96K17 158 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CNBD2Q96M20 576 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 TBX5Q99593 518 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CCL13Q99616 98 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 KIFC1Q9BW19 673 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 NMNAT1Q9HAN9 279 aaPredicted RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 ENY2Q9NPA8 101 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 HHLA2Q9UM44 414 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 FAM32AQ9Y421 112 aaKnown RBP1.68□□□□□ -2.14
UBR1-205ENST00000564540 V9GYQ6 96 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CAMSAP1Q5T5Y3 1602 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 CEP170Q5SW79 1584 aa1.68□□□□□ -2.14
UBR1-205ENST00000564540 NUP205Q92621 2012 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 DCCP43146 1447 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 CHD5Q8TDI0 1954 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 hADV38S2A0JD32 116 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 A8MUN3 132 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 C3orf84H3BNL1 204 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 LST1O00453 97 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 PDE6DO43924 150 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 CRYGDP07320 174 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 KCNE1P15382 129 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 CRYBB3P26998 211 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 SNRPD2P62316 118 aaKnown RBP1.67□□□□□ -2.14
UBR1-205ENST00000564540 FABP9Q0Z7S8 132 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 PYDC2Q56P42 97 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 TNFAIP8L3Q5GJ75 292 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 TEX36Q5VZQ5 186 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 C5orf46Q6UWT4 87 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 AKAP14Q86UN6 197 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 GPHB5Q86YW7 130 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 OR8B12Q8NGG6 310 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 OR2D3Q8NGH3 330 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 OR52L1Q8NGH7 329 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 RAB2BQ8WUD1 216 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 OR5P3Q8WZ94 311 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 CMSS1Q9BQ75 279 aaKnown RBP1.67□□□□□ -2.14
UBR1-205ENST00000564540 UQCC1Q9NVA1 299 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 TAAR3PQ9P1P4 343 aa1.67□□□□□ -2.14
UBR1-205ENST00000564540 OPTCQ9UBM4 332 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms