RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 CCL28Q9NRJ3 127 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 ADAM30Q9UKF2 790 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
CLK3-216ENST00000564468 SRRM4A7MD48 611 aaKnown RBP10.44□□□□□ -0.74
CLK3-216ENST00000564468 H3BUA1 57 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 HRASP01112 189 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 FXYD4P59646 89 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 RUNX1Q01196 453 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 EIF4EBP1Q13541 118 aaPredicted RBP10.44□□□□□ -0.74
CLK3-216ENST00000564468 SNX29P2Q8IUI4 249 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 OR6F1Q8NGZ6 308 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 RAX2Q96IS3 184 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 FAM103A1Q9BTL3 118 aaKnown RBP10.44□□□□□ -0.74
CLK3-216ENST00000564468 KLK15Q9H2R5 256 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 TAS2R8Q9NYW2 309 aa10.44□□□□□ -0.74
CLK3-216ENST00000564468 ZMAT5Q9UDW3 170 aaKnown RBP10.44□□□□□ -0.74
CLK3-216ENST00000564468 ARPC1BO15143 372 aaKnown RBP10.43□□□□□ -0.74
CLK3-216ENST00000564468 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLK3-216ENST00000564468 PMP2P02689 132 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 OR8U8P0C7N1 319 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 RCVRNP35243 200 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 RFX2P48378 723 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 RAB25P57735 213 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 TSPAN5P62079 268 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 RPL30P62888 115 aaKnown RBP10.43□□□□□ -0.74
CLK3-216ENST00000564468 PJVKQ0ZLH3 352 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 TNXAQ16473 311 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 PRSS8Q16651 343 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 LPCAT3Q6P1A2 487 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 TMEM17Q86X19 198 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 POC5Q8NA72 575 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 CD300LFQ8TDQ1 290 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 PHB2Q99623 299 aa10.43□□□□□ -0.74
CLK3-216ENST00000564468 ZNF2Q9BSG1 426 aaPredicted RBP10.43□□□□□ -0.74
CLK3-216ENST00000564468 I3L521 148 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 RGS5O15539 181 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 TNFSF12O43508 249 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 SOX15O60248 233 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 OR2A4O95047 310 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 SAA1P0DJI8 122 aaPredicted RBP10.42□□□□□ -0.74
CLK3-216ENST00000564468 HLA-DMAP28067 261 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 S100GP29377 79 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 HRH1P35367 487 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 KIAA0141Q14154 515 aaPredicted RBP10.42□□□□□ -0.74
CLK3-216ENST00000564468 CMTM1Q8IZ96 169 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 SPAG16Q8N0X2 631 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 OR11H1Q8NG94 326 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 OR1N2Q8NGR9 330 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 MOB3AQ96BX8 217 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 OR2A7Q96R45 310 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 ZNF355PQ9NSJ1 428 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 RABL2AQ9UBK7 228 aaPredicted RBP10.42□□□□□ -0.74
CLK3-216ENST00000564468 EXTL2Q9UBQ6 330 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 SCOCQ9UIL1 159 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 RABL2BQ9UNT1 228 aa10.42□□□□□ -0.74
CLK3-216ENST00000564468 A0A0G2JLM5 398 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 MPPED1O15442 326 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 BRI3O95415 125 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 HPRT1P00492 218 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 TRGV3P03979 118 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 MAS1LP35410 378 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 TPPP2P59282 170 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 ZNF616Q08AN1 781 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 SPCS2Q15005 226 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 DEFB136Q30KP8 78 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 FOXB2Q5VYV0 432 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 IDO2Q6ZQW0 420 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 ZNF818PQ6ZRF7 136 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 LYSMD2Q8IV50 215 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
CLK3-216ENST00000564468 RHOVQ96L33 236 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 DUX3Q96PT4 197 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 GNB4Q9HAV0 340 aa10.41□□□□□ -0.74
CLK3-216ENST00000564468 CCDC59Q9P031 241 aaKnown RBP10.41□□□□□ -0.74
CLK3-216ENST00000564468 SORL1Q92673 2214 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 MSGN1A6NI15 193 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 KBTBD11O94819 623 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 LGALS1P09382 135 aaKnown RBP10.4□□□□□ -0.74
CLK3-216ENST00000564468 GNRHRP30968 328 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 TAS2R31P59538 309 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.74
CLK3-216ENST00000564468 MRPS10P82664 201 aaKnown RBP10.4□□□□□ -0.74
CLK3-216ENST00000564468 FHL3Q13643 280 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 AADACL3Q5VUY0 350 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 SLC25A42Q86VD7 318 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 OR5T1Q8NG75 326 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 OR4A5Q8NH83 315 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 TMEM167AQ8TBQ9 72 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 FCAMRQ8WWV6 532 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 MS4A10Q96PG2 267 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 OR5B12Q96R08 314 aa10.4□□□□□ -0.74
CLK3-216ENST00000564468 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
CLK3-216ENST00000564468 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
CLK3-216ENST00000564468 GPR31O00270 319 aa10.39□□□□□ -0.75
CLK3-216ENST00000564468 IFNA6P05013 189 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms