RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 DCTN5Q9BTE1 182 aa8.83□□□□□ -1
RNF40-204ENST00000563683 RBKSQ9H477 322 aa8.83□□□□□ -1
RNF40-204ENST00000563683 NAGKQ9UJ70 344 aa8.83□□□□□ -1
RNF40-204ENST00000563683 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
RNF40-204ENST00000563683 PRRC2CQ9Y520 2896 aaKnown RBP8.82□□□□□ -1
RNF40-204ENST00000563683 TRAV24A0A0B4J272 114 aa8.82□□□□□ -1
RNF40-204ENST00000563683 ZG16O60844 167 aa8.82□□□□□ -1
RNF40-204ENST00000563683 KBTBD11O94819 623 aa8.82□□□□□ -1
RNF40-204ENST00000563683 S1PR2O95136 353 aa8.82□□□□□ -1
RNF40-204ENST00000563683 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
RNF40-204ENST00000563683 ACTL10Q5JWF8 245 aa8.82□□□□□ -1
RNF40-204ENST00000563683 Q6ZSR3 168 aa8.82□□□□□ -1
RNF40-204ENST00000563683 BAGE3Q86Y29 109 aa8.82□□□□□ -1
RNF40-204ENST00000563683 BAGE2Q86Y30 109 aa8.82□□□□□ -1
RNF40-204ENST00000563683 GUCD1Q96NT3 240 aa8.82□□□□□ -1
RNF40-204ENST00000563683 OR2V2Q96R30 315 aa8.82□□□□□ -1
RNF40-204ENST00000563683 PCGF1Q9BSM1 259 aa8.82□□□□□ -1
RNF40-204ENST00000563683 F6UZH7 168 aa8.82□□□□□ -1
RNF40-204ENST00000563683 SPINK4O60575 86 aa8.82□□□□□ -1
RNF40-204ENST00000563683 GABRA6Q16445 453 aa8.82□□□□□ -1
RNF40-204ENST00000563683 NRN1LQ496H8 165 aa8.82□□□□□ -1
RNF40-204ENST00000563683 TEX38Q6PEX7 206 aa8.82□□□□□ -1
RNF40-204ENST00000563683 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
RNF40-204ENST00000563683 GBGT1Q8N5D6 347 aa8.82□□□□□ -1
RNF40-204ENST00000563683 PLPPR1Q8TBJ4 325 aa8.82□□□□□ -1
RNF40-204ENST00000563683 OR6C3Q9NZP0 311 aa8.82□□□□□ -1
RNF40-204ENST00000563683 SSUH2Q9Y2M2 353 aa8.82□□□□□ -1
RNF40-204ENST00000563683 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
RNF40-204ENST00000563683 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
RNF40-204ENST00000563683 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
RNF40-204ENST00000563683 SMPD2O60906 423 aa8.82□□□□□ -1
RNF40-204ENST00000563683 MPV17P39210 176 aa8.82□□□□□ -1
RNF40-204ENST00000563683 WNT5AP41221 380 aa8.82□□□□□ -1
RNF40-204ENST00000563683 RANP62826 216 aaKnown RBP8.82□□□□□ -1
RNF40-204ENST00000563683 ATP6V1FQ16864 119 aa8.82□□□□□ -1
RNF40-204ENST00000563683 NMSQ5H8A3 153 aa8.82□□□□□ -1
RNF40-204ENST00000563683 KIR2DL5AQ8N109 375 aa8.82□□□□□ -1
RNF40-204ENST00000563683 TAF15Q92804 592 aaKnown RBP eCLIP8.82□□□□□ -1
RNF40-204ENST00000563683 WDYHV1Q96HA8 205 aa8.82□□□□□ -1
RNF40-204ENST00000563683 C12orf77C9JDV5 145 aa8.81□□□□□ -1
RNF40-204ENST00000563683 C11orf94C9JXX5 98 aa8.81□□□□□ -1
RNF40-204ENST00000563683 TMEM250H0YL14 139 aa8.81□□□□□ -1
RNF40-204ENST00000563683 IGHV1-2P23083 117 aa8.81□□□□□ -1
RNF40-204ENST00000563683 TNFSF10P50591 281 aa8.81□□□□□ -1
RNF40-204ENST00000563683 GNB1P62873 340 aa8.81□□□□□ -1
RNF40-204ENST00000563683 BATFQ16520 125 aa8.81□□□□□ -1
RNF40-204ENST00000563683 STUMQ69YW2 141 aa8.81□□□□□ -1
RNF40-204ENST00000563683 ZNRF1Q8ND25 227 aa8.81□□□□□ -1
RNF40-204ENST00000563683 RND1Q92730 232 aa8.81□□□□□ -1
RNF40-204ENST00000563683 SLC35E1Q96K37 410 aa8.81□□□□□ -1
RNF40-204ENST00000563683 HSD17B10Q99714 261 aaKnown RBP8.81□□□□□ -1
RNF40-204ENST00000563683 ZNF883P0CG24 379 aa8.81□□□□□ -1
RNF40-204ENST00000563683 MEF2BQ02080 365 aaPredicted RBP8.81□□□□□ -1
RNF40-204ENST00000563683 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
RNF40-204ENST00000563683 Q6ZT83 130 aa8.81□□□□□ -1
RNF40-204ENST00000563683 NEIL1Q96FI4 390 aaPredicted RBP8.81□□□□□ -1
RNF40-204ENST00000563683 TMEM50AO95807 157 aa8.81□□□□□ -1
RNF40-204ENST00000563683 TNFRSF1AP19438 455 aa8.81□□□□□ -1
RNF40-204ENST00000563683 ERHP84090 104 aaKnown RBP8.81□□□□□ -1
RNF40-204ENST00000563683 ZBTB34Q8NCN2 500 aa8.81□□□□□ -1
RNF40-204ENST00000563683 ITLN1Q8WWA0 313 aa8.81□□□□□ -1
RNF40-204ENST00000563683 MS4A10Q96PG2 267 aa8.81□□□□□ -1
RNF40-204ENST00000563683 PRR33A8MZF0 331 aa8.8□□□□□ -1
RNF40-204ENST00000563683 TYMSP04818 313 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CD55P08174 381 aa8.8□□□□□ -1
RNF40-204ENST00000563683 ADH4P08319 380 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CD59P13987 128 aa8.8□□□□□ -1
RNF40-204ENST00000563683 RPL23P62829 140 aaKnown RBP8.8□□□□□ -1
RNF40-204ENST00000563683 LCN2P80188 198 aa8.8□□□□□ -1
RNF40-204ENST00000563683 TMEM42Q69YG0 159 aa8.8□□□□□ -1
RNF40-204ENST00000563683 TMEM108Q6UXF1 575 aa8.8□□□□□ -1
RNF40-204ENST00000563683 ASCL4Q6XD76 172 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CENPVQ7Z7K6 275 aaPredicted RBP8.8□□□□□ -1
RNF40-204ENST00000563683 ZNF645Q8N7E2 425 aa8.8□□□□□ -1
RNF40-204ENST00000563683 IMMP2LQ96T52 175 aa8.8□□□□□ -1
RNF40-204ENST00000563683 GTF3C1Q12789 2109 aa8.8□□□□□ -1
RNF40-204ENST00000563683 PLCE1Q9P212 2302 aa8.8□□□□□ -1
RNF40-204ENST00000563683 IGKV3D-15A0A087WSY6 115 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CECR9P0C854 216 aa8.8□□□□□ -1
RNF40-204ENST00000563683 FAM201AQ5SY85 155 aa8.8□□□□□ -1
RNF40-204ENST00000563683 ODF3L1Q8IXM7 274 aa8.8□□□□□ -1
RNF40-204ENST00000563683 OR4S2Q8NH73 311 aa8.8□□□□□ -1
RNF40-204ENST00000563683 INTS1Q8N201 2190 aaKnown RBP8.8□□□□□ -1
RNF40-204ENST00000563683 FAM78BQ5VT40 261 aa8.8□□□□□ -1
RNF40-204ENST00000563683 TRAT1Q6PIZ9 186 aa8.8□□□□□ -1
RNF40-204ENST00000563683 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
RNF40-204ENST00000563683 ZDHHC16Q969W1 377 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CCL13Q99616 98 aa8.8□□□□□ -1
RNF40-204ENST00000563683 SPRR3Q9UBC9 169 aa8.8□□□□□ -1
RNF40-204ENST00000563683 RNF115Q9Y4L5 304 aa8.8□□□□□ -1
RNF40-204ENST00000563683 REG1BP48304 166 aa8.8□□□□□ -1
RNF40-204ENST00000563683 TIGITQ495A1 244 aa8.8□□□□□ -1
RNF40-204ENST00000563683 CORO2AQ92828 525 aa8.8□□□□□ -1
RNF40-204ENST00000563683 SLC35D1Q9NTN3 355 aa8.8□□□□□ -1
RNF40-204ENST00000563683 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
RNF40-204ENST00000563683 CTXND1A0A1B0GTU2 59 aa8.79□□□□□ -1
RNF40-204ENST00000563683 ODAMA1E959 279 aa8.79□□□□□ -1
RNF40-204ENST00000563683 CNIH1O95406 144 aa8.79□□□□□ -1
RNF40-204ENST00000563683 HPRT1P00492 218 aa8.79□□□□□ -1
RNF40-204ENST00000563683 CD1BP29016 333 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms