RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 GGT3PA6NGU5 568 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TMEM212A6NML5 194 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CD300LBA8K4G0 201 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SNRPGP15A8MWD9 76 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 F8VVB4 439 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 F8VWA3 439 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 NME4O00746 187 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TAAR5O14804 337 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TRAF3IP2O43734 574 aaPredicted RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 SYNGR1O43759 233 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CLDN11O75508 207 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TRAPPC6AO75865 159 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 HRASP01112 189 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 KRASP01116 189 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 P04436 131 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CSN2P05814 226 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 LINC00694P0DN24 101 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SLC25A4P12235 298 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 AADACP22760 399 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 PRDX3P30048 256 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 TSPOP30536 169 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR1E2P47887 323 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 RND2P52198 227 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 EMP1P54849 157 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 UBE2NP61088 152 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 GNG5P63218 68 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 FOXF1Q12946 379 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 VGLL4Q14135 290 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 ZSWIM7Q19AV6 140 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 FAM174BQ3ZCQ3 159 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 PRR30Q53SZ7 412 aaPredicted RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 Q6ZN92 141 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 MOB1BQ7L9L4 216 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 PPP1R27Q86WC6 154 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 MEX3DQ86XN8 651 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 TDHQ8IZJ6 230 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SLC22A18ASQ8N1D0 253 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 KRTCAP2Q8N6L1 136 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR8B12Q8NGG6 310 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR51A4Q8NGJ6 313 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR6K6Q8NGW6 343 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 MFSD8Q8NHS3 518 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CNIH3Q8TBE1 160 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 PLPPR1Q8TBJ4 325 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 RXFP2Q8WXD0 754 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CRYGNQ8WXF5 182 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TSACCQ96A04 125 aaPredicted RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 TIMD4Q96H15 378 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 DERL3Q96Q80 235 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR4C12Q96R67 309 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 LINC01587Q99440 93 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 GABRG3Q99928 467 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SCRT1Q9BWW7 348 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TSSK6Q9BXA6 273 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SAMD10Q9BYL1 202 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 DPY30Q9C005 99 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR2H1Q9GZK4 316 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 FXYD6Q9H0Q3 95 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 RNASE7Q9H1E1 156 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 OR2D2Q9H210 308 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 BANF2Q9H503 90 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 TMEM9BQ9NQ34 198 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 FAM206AQ9NX38 181 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 ZNF581Q9P0T4 197 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 GNG12Q9UBI6 72 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 MARCOQ9UEW3 520 aaPredicted RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 RCL1Q9Y2P8 373 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 LSM5Q9Y4Y9 91 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 LINC00312Q9Y6C7 94 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 MROH2AA6NES4 1674 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 CLTCQ00610 1675 aaKnown RBP2.94□□□□□ -1.94
GDE1-202ENST00000563645 SBF1O95248 1867 aa2.94□□□□□ -1.94
GDE1-202ENST00000563645 SHANK3Q9BYB0 1731 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 ADAMTS9Q9P2N4 1935 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 ABCA7Q8IZY2 2146 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 SCN9AQ15858 1988 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 PIK3C2AO00443 1686 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 TRBV24-1A0A075B6N3 115 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 C7orf71A4D174 169 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 OR51F1A6NGY5 319 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 ZNF860A6NHJ4 632 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 LRRC30A6NM36 301 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 SIRPB1O00241 398 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 XKRYO14609 159 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 CDC42EP2O14613 210 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 NXPH4O95158 308 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 SFT2D2O95562 160 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 OR2H2O95918 312 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 APOA2P02652 100 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 ARL2P36404 184 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 GUCA1AP43080 201 aaPredicted RBP2.93□□□□□ -1.94
GDE1-202ENST00000563645 LHX2P50458 406 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 EFNB2P52799 333 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 MTCP1P56278 107 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 C1QTNF8P60827 252 aa2.93□□□□□ -1.94
GDE1-202ENST00000563645 SLC35B1P78383 322 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms