RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 IL3RAP26951 378 aa9.94□□□□□ -0.82
ABCA3-203ENST00000563623 SVIPQ8NHG7 77 aa9.94□□□□□ -0.82
ABCA3-203ENST00000563623 WDYHV1Q96HA8 205 aa9.94□□□□□ -0.82
ABCA3-203ENST00000563623 SAMD10Q9BYL1 202 aa9.94□□□□□ -0.82
ABCA3-203ENST00000563623 TTTY12Q9BZ98 90 aa9.94□□□□□ -0.82
ABCA3-203ENST00000563623 A8MXE2 369 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 C12orf77C9JDV5 145 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 FABP6P51161 128 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ATP6V1FQ16864 119 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 PMS2CLQ68D20 193 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 TMEM14EPQ6UXP3 125 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 OR1L6Q8NGR2 347 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 SLC25A40Q8TBP6 338 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ACY3Q96HD9 319 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 DCTN5Q9BTE1 182 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 CACNA1GO43497 2377 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 TPRP12270 2363 aaKnown RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 IGLV2-14P01704 120 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 CLDN18P56856 261 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 TMEM108Q6UXF1 575 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ZNF497Q6ZNH5 498 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 BAGE3Q86Y29 109 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 BAGE2Q86Y30 109 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 VKORC1L1Q8N0U8 176 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 CNEP1R1Q8N9A8 125 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 TBX15Q96SF7 602 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 LINC00470Q9BZP3 86 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 PKIBQ9C010 78 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 NCOR1P1Q9H4R4 102 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ROS1P08922 2347 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 HEATR1Q9H583 2144 aaKnown RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 PSPNO60542 156 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 SSTR5P35346 364 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 TGIF2LYQ8IUE0 185 aa9.93□□□□□ -0.82
ABCA3-203ENST00000563623 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 FAM103A1Q9BTL3 118 aaKnown RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 ZNF703Q9H7S9 590 aaPredicted RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 RYDENQ9NUL5 291 aaKnown RBP9.93□□□□□ -0.82
ABCA3-203ENST00000563623 RAB7AP51149 207 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 CISD2Q8N5K1 135 aaKnown RBP9.92□□□□□ -0.82
ABCA3-203ENST00000563623 ZNF645Q8N7E2 425 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 LPAR2Q9HBW0 351 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 TRAV34A0A0B4J273 112 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 CHRNB4P30926 498 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 SP5Q6BEB4 398 aaPredicted RBP9.92□□□□□ -0.82
ABCA3-203ENST00000563623 HOXC12P31275 282 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 TNFSF10P50591 281 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 MIC13Q5XKP0 118 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 QTRT1Q9BXR0 403 aaKnown RBP9.92□□□□□ -0.82
ABCA3-203ENST00000563623 HSPB7Q9UBY9 170 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 PAM16Q9Y3D7 125 aa9.92□□□□□ -0.82
ABCA3-203ENST00000563623 KIAA1549Q9HCM3 1950 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 FAM90A26D6RGX4 464 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
ABCA3-203ENST00000563623 ACTL6BO94805 426 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 CD1BP29016 333 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 CCKARP32238 428 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 GPR12P47775 334 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 TEX38Q6PEX7 206 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 WDR86Q86TI4 376 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 Q8IYB0 196 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 GCM1Q9NP62 436 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 PPIAL4AQ9Y536 164 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 TIMM9Q9Y5J7 89 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 AGFG2O95081 481 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 CER1O95813 267 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 CBLN1P23435 193 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 GCH1P30793 250 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 SRP14P37108 136 aaKnown RBP9.91□□□□□ -0.82
ABCA3-203ENST00000563623 MEOX1P50221 254 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 GNB1P62873 340 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 CMTM2Q8TAZ6 248 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 MRPS18CQ9Y3D5 142 aaKnown RBP9.91□□□□□ -0.82
ABCA3-203ENST00000563623 ADAMTS20P59510 1910 aa9.91□□□□□ -0.82
ABCA3-203ENST00000563623 IGKV3D-15A0A087WSY6 115 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 TRBV6-6A0A0A6YYG2 114 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.9□□□□□ -0.82
ABCA3-203ENST00000563623 M0R1X1 148 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 SLC17A3O00476 420 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 ITGB1BP1O14713 200 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 LAMTOR5O43504 91 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 NEURL1O76050 574 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 CRYABP02511 175 aaKnown RBP9.9□□□□□ -0.82
ABCA3-203ENST00000563623 ARL14EPLP0DKL9 152 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 ERVK-16P61578 105 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 VAMP3Q15836 100 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 ZNF114Q8NC26 417 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 AGMATQ9BSE5 352 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 STRADBQ9C0K7 418 aa9.9□□□□□ -0.82
ABCA3-203ENST00000563623 LNP1A1A4G5 178 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms