RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PPIFP30405 207 aaKnown RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 CRIP2P52943 208 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 FXYD4P59646 89 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 RPS16P62249 146 aaKnown RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 CX3CL1P78423 397 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 NDPQ00604 133 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 RTL8BQ17RB0 113 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 MRGPRG-AS1Q2M3A8 158 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 ACTBL2Q562R1 376 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 C19orf54Q5BKX5 351 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 AADACL3Q5VUY0 350 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 HIST2H2BDQ6DRA6 164 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF562Q6V9R5 426 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 KCTD9Q7L273 389 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 LHFPL1Q86WI0 220 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 OSR1Q8TAX0 266 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-204ENST00000563130 SLC5A7Q9GZV3 580 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 OR51J1Q9H342 316 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 TAS2R8Q9NYW2 309 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 LINC00527Q9UJ94 153 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 V9GYH0 126 aa4.86□□□□□ -1.63
CNOT1-204ENST00000563130 M0QZ24 198 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ATP6V0E1O15342 81 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 RBFOX2O43251 390 aaKnown RBP eCLIP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 GSTZ1O43708 216 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 SLC25A17O43808 307 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 CRYZL1O95825 349 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ETV6P41212 452 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 UCP3P55916 312 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TAS2R19P59542 299 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 HERV-K104P61576 105 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 IL18Q14116 193 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 RNASE12Q5GAN4 147 aaKnown RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF329Q86UD4 541 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 CCDC190Q86UF4 302 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 PPP1R27Q86WC6 154 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TMEM17Q86X19 198 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ARRDC1Q8N5I2 433 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 COMMD1Q8N668 190 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 RNF152Q8N8N0 203 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TMEM229BQ8NBD8 167 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 BORCS5Q969J3 196 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 GPHA2Q96T91 129 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 GON7Q9BXV9 100 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TINAGL1Q9GZM7 467 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 FXYD6Q9H0Q3 95 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 METTL1Q9UBP6 276 aaKnown RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 PRELID3BQ9Y3B1 194 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 FBXO7Q9Y3I1 522 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 WNK1Q9H4A3 2382 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 PLXNB1O43157 2135 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 FABP12A6NFH5 140 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 M0QYG6 137 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 SHOXO15266 292 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 PAX4O43316 350 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TNFSF12O43508 249 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 FCGR3BO75015 233 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 IGHG4P01861 327 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF735P0CB33 412 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 MECP2P51608 486 aaKnown RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 UBE2KP61086 200 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TSPAN5P62079 268 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 ZNF79Q15937 498 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 RNASE10Q5GAN6 216 aaKnown RBP4.85□□□□□ -1.63
CNOT1-204ENST00000563130 NDUFA11Q86Y39 141 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TEX45Q8NA69 505 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 MINDY2Q8NBR6 621 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 OR4X2Q8NGF9 303 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 OR4D10Q8NGI6 311 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 TCTEX1D2Q8WW35 142 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 NUBP2Q9Y5Y2 271 aa4.85□□□□□ -1.63
CNOT1-204ENST00000563130 G3V318 75 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 GPR31O00270 319 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 ARPC1BO15143 372 aaKnown RBP4.84□□□□□ -1.63
CNOT1-204ENST00000563130 RAMP3O60896 148 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 PGLYRP1O75594 196 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-204ENST00000563130 CA2P00918 260 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 PTBP1P26599 531 aaKnown RBP eCLIP4.84□□□□□ -1.63
CNOT1-204ENST00000563130 PSMB8P28062 276 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 S100A5P33763 92 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 SLC35B1P78383 322 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 PJVKQ0ZLH3 352 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 CBX3Q13185 183 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 POU2AF1Q16633 256 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 C2orf68Q2NKX9 166 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 STEAP1BQ6NZ63 245 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 LPCAT3Q6P1A2 487 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 TEX38Q6PEX7 206 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 OR6Q1Q8NGQ2 317 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 OR4S2Q8NH73 311 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 MYOZ3Q8TDC0 251 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 MRGPRFQ96AM1 343 aa4.84□□□□□ -1.63
CNOT1-204ENST00000563130 TET2Q6N021 2002 aaPredicted RBP4.84□□□□□ -1.63
CNOT1-204ENST00000563130 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms